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The map label for this gene is gatC

Identifier: 193213755

GI number: 193213755

Start: 47180

End: 47467

Strand: Direct

Name: gatC

Synonym: Ctha_0035

Alternate gene names: 193213755

Gene position: 47180-47467 (Clockwise)

Preceding gene: 193213754

Following gene: 193213756

Centisome position: 1.43

GC content: 45.49

Gene sequence:

>288_bases
ATGTCCGTTACCAAACAAGACGTCGAATACATCGCCACGCTTGCGCGTCTTTCTTTTTCCGAAGATGAAAAGGAAAAAAT
GACGAAAGAGCTCAACACCATTTTGCATTATGTTGAAAAGCTCAATGAACTCGATACAGAAGAAGTTGAAGCGCTCAACA
ACATGAACGAGCGCCACAATGTGCTCCGCCCAGACGAAATTGTAGCGTCAATCGAAAACAGCAAGGCGATCAAAAATGCG
CCTGATAGCGTCGAGCGGTTCTTCAAAGTGCCGAAAGTAATCGGCTGA

Upstream 100 bases:

>100_bases
CGTCAGAAAAAAATACCGGCTCAGCCCAACATGAATTCACTTCAATTCATTGGGGATTTAAGACTGAAGTTTTTTCCATA
AAATCTTATTCCATAGCATT

Downstream 100 bases:

>100_bases
GCCGAAACGCTTACGGACAATCATATGATCTCGTGCTCCGAAAAAAATGGCGCGGTGGATTTCAGTGTGCGCTTGCAACC
GCGAGCTTCAAAGAATGAAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVTKQDVEYIATLARLSFSEDEKEKMTKELNTILHYVEKLNELDTEEVEALNNMNERHNVLRPDEIVASIENSKAIKNA
PDSVERFFKVPKVIG

Sequences:

>Translated_95_residues
MSVTKQDVEYIATLARLSFSEDEKEKMTKELNTILHYVEKLNELDTEEVEALNNMNERHNVLRPDEIVASIENSKAIKNA
PDSVERFFKVPKVIG
>Mature_94_residues
SVTKQDVEYIATLARLSFSEDEKEKMTKELNTILHYVEKLNELDTEEVEALNNMNERHNVLRPDEIVASIENSKAIKNAP
DSVERFFKVPKVIG

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CHLT3 (B3QSB6)

Other databases:

- EMBL:   CP001100
- RefSeq:   YP_001994954.1
- GeneID:   6421207
- GenomeReviews:   CP001100_GR
- KEGG:   cts:Ctha_0035
- HOGENOM:   HBG586403
- OMA:   SNMNARM
- ProtClustDB:   PRK00034
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10936; Mature: 10804

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTKQDVEYIATLARLSFSEDEKEKMTKELNTILHYVEKLNELDTEEVEALNNMNERHN
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHC
VLRPDEIVASIENSKAIKNAPDSVERFFKVPKVIG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVTKQDVEYIATLARLSFSEDEKEKMTKELNTILHYVEKLNELDTEEVEALNNMNERHN
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHC
VLRPDEIVASIENSKAIKNAPDSVERFFKVPKVIG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA