| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213729
Identifier: 193213729
GI number: 193213729
Start: 13989
End: 14675
Strand: Direct
Name: 193213729
Synonym: Ctha_0009
Alternate gene names: NA
Gene position: 13989-14675 (Clockwise)
Preceding gene: 193213726
Following gene: 193213730
Centisome position: 0.42
GC content: 44.1
Gene sequence:
>687_bases ATGCCTCAATTTTTGAAGACTTTTTTGATTGGTATTTCGCTTGCCATTTTTGTTGGGCTTCTCATTTTGCTGCCCTCTTA CTTCTTTGGAAATCCTTATGATTGGCGAGTTCCATTGGCGTACTTCAGCTATTTTTCGCTTTTCTCGAGTTTCCTTTTGC GATCCGTTCGCTATGGAAACCTTTCCGCAACAAAAACTGACCGACAACGCAAAACTCGCGCCGATAGTCTTTCCTACAAA ATCCTTTTTTGGGGGTTAACGGTTGCGCACTGGCTGAGCATTTACGAATATTTTCATCCTATTTTGACGCTATCGGACAC GGTTGCCACAACCCTAACGCCGCTTGGGATCATATTCATGGCTGGCGCCATTTTGCTGAATCATCACGCCGCGCATACAC TTGGAAAATTCTTTGACCGGCTCCACATTTCCGATGGCCATCAGCTCATTACAACGGGCGCTTATCGCTTTGTTCGTCAT CCGATCTACACCAGCTATCTATGTTTGTTCCTTGGGTTTTGCTTGCTGTTCAAAAGTGCGGTGGCGTGTTTGCTTATGTT TATCGTCTGTTTCATTGGCTATCGGAGTCGCATTAAACTGGAAGAAAACATGCTCTTAGAACAATTCGGCGCGGAATATG AAGCGTATAGGAACAGCACGAAAAGATTGTTCCCTTTTTTATATTAA
Upstream 100 bases:
>100_bases CATTGAACAAAAACCACTTTACCGGAAAGCCTTCGTTTCGCAAAAGATACTTATTTTACAAGAATTTTTCCGATTCATAA GAACCTTGAGCGTGGGACAG
Downstream 100 bases:
>100_bases AATACTAACATTAAAAATGGTTAGTTTTGCGAAATACAAACTGATTTCAGCAGTTCATTCATAAGCACCGATTTTCTCAA TTATTTTTTAGGAGTTTTTT
Product: Isoprenylcysteine carboxyl methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MPQFLKTFLIGISLAIFVGLLILLPSYFFGNPYDWRVPLAYFSYFSLFSSFLLRSVRYGNLSATKTDRQRKTRADSLSYK ILFWGLTVAHWLSIYEYFHPILTLSDTVATTLTPLGIIFMAGAILLNHHAAHTLGKFFDRLHISDGHQLITTGAYRFVRH PIYTSYLCLFLGFCLLFKSAVACLLMFIVCFIGYRSRIKLEENMLLEQFGAEYEAYRNSTKRLFPFLY
Sequences:
>Translated_228_residues MPQFLKTFLIGISLAIFVGLLILLPSYFFGNPYDWRVPLAYFSYFSLFSSFLLRSVRYGNLSATKTDRQRKTRADSLSYK ILFWGLTVAHWLSIYEYFHPILTLSDTVATTLTPLGIIFMAGAILLNHHAAHTLGKFFDRLHISDGHQLITTGAYRFVRH PIYTSYLCLFLGFCLLFKSAVACLLMFIVCFIGYRSRIKLEENMLLEQFGAEYEAYRNSTKRLFPFLY >Mature_227_residues PQFLKTFLIGISLAIFVGLLILLPSYFFGNPYDWRVPLAYFSYFSLFSSFLLRSVRYGNLSATKTDRQRKTRADSLSYKI LFWGLTVAHWLSIYEYFHPILTLSDTVATTLTPLGIIFMAGAILLNHHAAHTLGKFFDRLHISDGHQLITTGAYRFVRHP IYTSYLCLFLGFCLLFKSAVACLLMFIVCFIGYRSRIKLEENMLLEQFGAEYEAYRNSTKRLFPFLY
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26420; Mature: 26289
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQFLKTFLIGISLAIFVGLLILLPSYFFGNPYDWRVPLAYFSYFSLFSSFLLRSVRYGN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LSATKTDRQRKTRADSLSYKILFWGLTVAHWLSIYEYFHPILTLSDTVATTLTPLGIIFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAILLNHHAAHTLGKFFDRLHISDGHQLITTGAYRFVRHPIYTSYLCLFLGFCLLFKSA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACLLMFIVCFIGYRSRIKLEENMLLEQFGAEYEAYRNSTKRLFPFLY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCC >Mature Secondary Structure PQFLKTFLIGISLAIFVGLLILLPSYFFGNPYDWRVPLAYFSYFSLFSSFLLRSVRYGN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LSATKTDRQRKTRADSLSYKILFWGLTVAHWLSIYEYFHPILTLSDTVATTLTPLGIIFM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAILLNHHAAHTLGKFFDRLHISDGHQLITTGAYRFVRHPIYTSYLCLFLGFCLLFKSA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACLLMFIVCFIGYRSRIKLEENMLLEQFGAEYEAYRNSTKRLFPFLY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA