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The map label for this gene is exoR [H]

Identifier: 192291576

GI number: 192291576

Start: 3450336

End: 3451157

Strand: Reverse

Name: exoR [H]

Synonym: Rpal_3203

Alternate gene names: 192291576

Gene position: 3451157-3450336 (Counterclockwise)

Preceding gene: 192291577

Following gene: 192291574

Centisome position: 60.08

GC content: 68.0

Gene sequence:

>822_bases
ATGCGGAATTTTAAGCGTAGCGTTTTTGCCGCGTTGCTGATCGGCGCAGGAGCGAGCGCCGTCCCGGCGGCTGCGTTCGA
AGGCACCCCGGTTCGCCCGGAGGATACCGCGATCCCGGTTGCCACCAGCCAGCCGGCCACCGCGCCGGCGCTGAAGAAGG
CGCTGCCGGCGGCGCCATCGACCACCTCGCTCACGGCCTTGCAGTATGCCGCCGAGGGCGGCCACCCGATCGCGCAGTGG
CGGCTCGGGAAGATGTATGCCGATGGCAACGGCGTCGACCAGGACGACCTGCGCGCCTTCGACTATTTCAGCAAAATCGC
CAATGCCCACGCCGAGGACAGCCCGTCGGCGCCGCAGGCTGCGATCGTCGCCAACGCCTTTGTGGCGCTCGGCCGCTACT
ACCTCGACGGCATCCCGAATTCGAAGGTCAAGCGCGATCCGGAGCGGGCGCGCGAGATGTTCTCCTACGCCGCCTCGTAT
TTCGGCAATGCCGACGCGCAGTATGACCTGGCGCGGCTGTACATCGACGGCGTCGGCGTGCCGCGCGACTTCCGCTACGG
CGCGCGCTGGCTTGGCCTCGCCGCCCAGAAGGGCCAGCATCAGGCCCAGGCCATGCTCGGCCAACTGCTGTTCAACGGCG
AAAAACTGCCGCGCCAGGCCGCTCGCGGCCTGATGTGGCTGACGCTGGCCCGCGATGCCGCGACGCCGGAAGAGGCCTGG
ATCAAGGACAGCTACAACAAGGCCTTCTCCAAGGCATCCGACGACGACCGGGTGATGGCGCTGCAGATGCTCGAGCACTG
GGTCCAGGGCCGGCGGGACTGA

Upstream 100 bases:

>100_bases
GAAACGGGTGTTGCCGCGACAGAGGAGAGGGCGGGAGCGTGTTGGATGGAAAGCCGGCCGGTCGTTGCGACCGCACCGGG
GGTGACCCGCGAGATGTGCG

Downstream 100 bases:

>100_bases
GGCCGTCACCGGGCGGCGTTCCAGCACCGGCGATCCCATCTATCAGCGAGCACAACCTCATCCTGAGGTACCCGCCGTAT
AGCGGCGGGCCTCGAAGGAT

Product: Sel1 domain-containing protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQPATAPALKKALPAAPSTTSLTALQYAAEGGHPIAQW
RLGKMYADGNGVDQDDLRAFDYFSKIANAHAEDSPSAPQAAIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASY
FGNADAQYDLARLYIDGVGVPRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAARGLMWLTLARDAATPEEAW
IKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD

Sequences:

>Translated_273_residues
MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQPATAPALKKALPAAPSTTSLTALQYAAEGGHPIAQW
RLGKMYADGNGVDQDDLRAFDYFSKIANAHAEDSPSAPQAAIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASY
FGNADAQYDLARLYIDGVGVPRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAARGLMWLTLARDAATPEEAW
IKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD
>Mature_273_residues
MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQPATAPALKKALPAAPSTTSLTALQYAAEGGHPIAQW
RLGKMYADGNGVDQDDLRAFDYFSKIANAHAEDSPSAPQAAIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASY
FGNADAQYDLARLYIDGVGVPRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAARGLMWLTLARDAATPEEAW
IKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD

Specific function: Negatively modulates exopolysaccharide (EPS) biosynthesis [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI151301150, Length=170, Percent_Identity=31.7647058823529, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 29667; Mature: 29667

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQPATAPALKKALPAAPS
CCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEECEECCCCCCHHHHHHHCCCCCC
TTSLTALQYAAEGGHPIAQWRLGKMYADGNGVDQDDLRAFDYFSKIANAHAEDSPSAPQA
CCHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
AIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASYFGNADAQYDLARLYIDGVGV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCC
PRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAARGLMWLTLARDAATPEEAW
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCCCHHHH
IKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRNFKRSVFAALLIGAGASAVPAAAFEGTPVRPEDTAIPVATSQPATAPALKKALPAAPS
CCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEECEECCCCCCHHHHHHHCCCCCC
TTSLTALQYAAEGGHPIAQWRLGKMYADGNGVDQDDLRAFDYFSKIANAHAEDSPSAPQA
CCHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
AIVANAFVALGRYYLDGIPNSKVKRDPERAREMFSYAASYFGNADAQYDLARLYIDGVGV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCC
PRDFRYGARWLGLAAQKGQHQAQAMLGQLLFNGEKLPRQAARGLMWLTLARDAATPEEAW
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEECCCCCCCHHHH
IKDSYNKAFSKASDDDRVMALQMLEHWVQGRRD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1711027; 11481430 [H]