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The map label for this gene is 192291574

Identifier: 192291574

GI number: 192291574

Start: 3448857

End: 3449195

Strand: Reverse

Name: 192291574

Synonym: Rpal_3201

Alternate gene names: NA

Gene position: 3449195-3448857 (Counterclockwise)

Preceding gene: 192291576

Following gene: 192291573

Centisome position: 60.05

GC content: 63.72

Gene sequence:

>339_bases
ATGGTCGAAGCCATGCAGCTCAGGGGCATGACCAAGCAGCATGCCCTGGCGTTCGCGATGGGCGTCAATGAAAGCACGGT
GACCCGCTGGAAGAACAATGGCCCGATCTCGGTCGATCACGCGGTGCTGCTGTGCAGCGTTCTCGACATCTCGCTGGACT
GGTTTCTGACCGGCCGCGGTCGGATCGACGGCCACACCACCCTCCCGGCGCGTGCGGAGCCGGCTGATTCGCGACTGGTC
AGCTGCATCCGGCGGGCCGAGATGCGGATGTCGGAGCGCTCCAAGACGCTCCTGATCGCCTTCATCAGCTCGTTGTTTCC
CGAGGTCTCAGAGCTCTGA

Upstream 100 bases:

>100_bases
CAAATCTGGCGAGGCAATCGTGTAAGTCGCCGCGCCATCGTCCACGGCAGCGCGATGAACCGAGAGCGGAGCGGCGGGCA
TGTCGAGTCGCGGAGCACGG

Downstream 100 bases:

>100_bases
ACGGCCGAAGTTGCCACCCGCGCAAGTTGAGCGGCTGCATCTTGCTCGCAATGCAATCATAAGTTGCATTCTGAGGCGGT
TGCCTGCGTTACGGTTGTGC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulators

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MVEAMQLRGMTKQHALAFAMGVNESTVTRWKNNGPISVDHAVLLCSVLDISLDWFLTGRGRIDGHTTLPARAEPADSRLV
SCIRRAEMRMSERSKTLLIAFISSLFPEVSEL

Sequences:

>Translated_112_residues
MVEAMQLRGMTKQHALAFAMGVNESTVTRWKNNGPISVDHAVLLCSVLDISLDWFLTGRGRIDGHTTLPARAEPADSRLV
SCIRRAEMRMSERSKTLLIAFISSLFPEVSEL
>Mature_112_residues
MVEAMQLRGMTKQHALAFAMGVNESTVTRWKNNGPISVDHAVLLCSVLDISLDWFLTGRGRIDGHTTLPARAEPADSRLV
SCIRRAEMRMSERSKTLLIAFISSLFPEVSEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12459; Mature: 12459

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAMQLRGMTKQHALAFAMGVNESTVTRWKNNGPISVDHAVLLCSVLDISLDWFLTGRG
CCCCHHHCCCCHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCEEEEEECCC
RIDGHTTLPARAEPADSRLVSCIRRAEMRMSERSKTLLIAFISSLFPEVSEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEAMQLRGMTKQHALAFAMGVNESTVTRWKNNGPISVDHAVLLCSVLDISLDWFLTGRG
CCCCHHHCCCCHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHHHHHHCEEEEEECCC
RIDGHTTLPARAEPADSRLVSCIRRAEMRMSERSKTLLIAFISSLFPEVSEL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA