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The map label for this gene is 192291543

Identifier: 192291543

GI number: 192291543

Start: 3414351

End: 3415223

Strand: Reverse

Name: 192291543

Synonym: Rpal_3169

Alternate gene names: NA

Gene position: 3415223-3414351 (Counterclockwise)

Preceding gene: 192291544

Following gene: 192291539

Centisome position: 59.46

GC content: 69.76

Gene sequence:

>873_bases
ATGAGCGAGTCCGCCGCTAGCACCAGCGCTGCCGCGTTCTGCGCCGGCTTGGTGCGCGAGGCCGACTTCGACCGTTACGC
GGCGACGCTGTTCGTCCCGCCCGAGAAACGCCGCTCGCTGTTCGCGCTCGCTGCCTTCAACGCAGAGATCGTGCGCGTGC
GCAGCCAGGTCAGCCAGCCACTGCCCGGGGAGGTCCGGCTGCAGTGGTGGACCGATCTGCTCGCCGGCACCGCGCATGGC
GGCGCCGAAGGCAATCCGGTCGCGGCCGAACTGACGCGCGCGATCGCCGAGCATGCGCTGCCCGTCGAACCGCTGACGCG
GCTGATCGAGGCGCACATTTTCGACCTCTACAACGACCCGATGCCGGACTGGACGGTGCTCGAGCCGCATCTCGCCGAAA
CCGAGGGCGCGCTGATCTCGCTGACCGCGTGGGTGCTCGCGCAGGGCGCCGGGCAGGCTTCGGACGCGGTCGAGCACGTG
GCGCGGCACGCCGGCGTCGTGGTCGGAGTCGCGCGCATCGTGGCGCGGCTGCCTTATGACTCCGCGCGTCGCCAGCTGTA
TCTGCCGAACGACGTGCTGCAGCGGCACGGCTGTGATTTGGAGCAGGTGTTTAGCGGCCAGTCGACCGCAGCGCTGCGTG
CTGCTCTCACTGAGGTGGTCGCCGAGGCGCGCAAGCATCTCGATCAGGCGTTTCAGGAGCTGATCGAGCTGCCGGCAGCG
GTCCGCCCAGCCTTCTTGCCGCTCGCGCTCGCTTGCCGCGATCTCGACAGCCTCGCGGCGCCGGAGCGCGACCCGTTCAC
TCCCTTCGAGCGTTCGCGCCTGGCTACGCTGTGGACGCTGTGGCGGGCGAGCCGAAGCAAACCCTTTCGCTAG

Upstream 100 bases:

>100_bases
ATGTCGTACTCGACACCATGCAGACCGGTCCTGCGATCCGGACCTACAACATCATGATCGGCGAGCGGCGGCGCGTTGCG
GCAGCGCTAATTGCGGTGCC

Downstream 100 bases:

>100_bases
GACCGGACCGCGCTGGCGACGTCCGGCTGCTACGCCGCCTTCGGCAGCTTCAGGTGCGCGGCGATCCAGGCGTCGATGTC
GGCGAGGGCGCGAGCGCTGA

Product: phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Terpenoid Synthase; Squalene; Squalene And Phytoene Synthases Superfamily; Phytoene/Squalene Synthetase-Like Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSESAASTSAAAFCAGLVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQPLPGEVRLQWWTDLLAGTAHG
GAEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDPMPDWTVLEPHLAETEGALISLTAWVLAQGAGQASDAVEHV
ARHAGVVVGVARIVARLPYDSARRQLYLPNDVLQRHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAA
VRPAFLPLALACRDLDSLAAPERDPFTPFERSRLATLWTLWRASRSKPFR

Sequences:

>Translated_290_residues
MSESAASTSAAAFCAGLVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQPLPGEVRLQWWTDLLAGTAHG
GAEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDPMPDWTVLEPHLAETEGALISLTAWVLAQGAGQASDAVEHV
ARHAGVVVGVARIVARLPYDSARRQLYLPNDVLQRHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAA
VRPAFLPLALACRDLDSLAAPERDPFTPFERSRLATLWTLWRASRSKPFR
>Mature_289_residues
SESAASTSAAAFCAGLVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQPLPGEVRLQWWTDLLAGTAHGG
AEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDPMPDWTVLEPHLAETEGALISLTAWVLAQGAGQASDAVEHVA
RHAGVVVGVARIVARLPYDSARRQLYLPNDVLQRHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAAV
RPAFLPLALACRDLDSLAAPERDPFTPFERSRLATLWTLWRASRSKPFR

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=234, Percent_Identity=28.6324786324786, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24641447, Length=257, Percent_Identity=27.2373540856031, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 31697; Mature: 31566

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESAASTSAAAFCAGLVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQP
CCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPGEVRLQWWTDLLAGTAHGGAEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDP
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
MPDWTVLEPHLAETEGALISLTAWVLAQGAGQASDAVEHVARHAGVVVGVARIVARLPYD
CCCCEEECCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SARRQLYLPNDVLQRHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAA
HHHCEEECCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRPAFLPLALACRDLDSLAAPERDPFTPFERSRLATLWTLWRASRSKPFR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SESAASTSAAAFCAGLVREADFDRYAATLFVPPEKRRSLFALAAFNAEIVRVRSQVSQP
CCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LPGEVRLQWWTDLLAGTAHGGAEGNPVAAELTRAIAEHALPVEPLTRLIEAHIFDLYNDP
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
MPDWTVLEPHLAETEGALISLTAWVLAQGAGQASDAVEHVARHAGVVVGVARIVARLPYD
CCCCEEECCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SARRQLYLPNDVLQRHGCDLEQVFSGQSTAALRAALTEVVAEARKHLDQAFQELIELPAA
HHHCEEECCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VRPAFLPLALACRDLDSLAAPERDPFTPFERSRLATLWTLWRASRSKPFR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA