| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291534
Identifier: 192291534
GI number: 192291534
Start: 3407255
End: 3407503
Strand: Reverse
Name: 192291534
Synonym: Rpal_3160
Alternate gene names: NA
Gene position: 3407503-3407255 (Counterclockwise)
Preceding gene: 192291539
Following gene: 192291533
Centisome position: 59.32
GC content: 60.64
Gene sequence:
>249_bases ATGTCGGACCTTCTGGCGCGCATCACGATCGACCCTGAGGTGCTCCACGGCCGCCCCTGCATTCGCGGCATGCGGATCAG CGTCGCGGATGTGCTCGCGTTGCTGTCTTCCGGCGCGTCGCGTGACGAGATCCTGGATGATTACCCCTATCTCGAAAATG CCGACATCGATGCGGTCCTGGCCTTCGCGGCTAAGCAGACCGATCATCCGCGCCTGACGGCAGATGAATTCCAAGAAGTA AATCGCTGA
Upstream 100 bases:
>100_bases GTGACTGAGCGCCGGATGCGGGCCGGGGAGTTTGGGAGCGGATCGGCGACGACTGACAGCCTGGCCGTTCCATGTTAGCC TCGGCGTCTCGGAGGAACAG
Downstream 100 bases:
>100_bases GAAAGCGCCATGAGTGGACGATTGATTGAGATCTTCCTGCCTGACTCAGAAATTCCAACTTACCGACACGGCCGGATTGC GAACAGAGCGATCCAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSDLLARITIDPEVLHGRPCIRGMRISVADVLALLSSGASRDEILDDYPYLENADIDAVLAFAAKQTDHPRLTADEFQEV NR
Sequences:
>Translated_82_residues MSDLLARITIDPEVLHGRPCIRGMRISVADVLALLSSGASRDEILDDYPYLENADIDAVLAFAAKQTDHPRLTADEFQEV NR >Mature_81_residues SDLLARITIDPEVLHGRPCIRGMRISVADVLALLSSGASRDEILDDYPYLENADIDAVLAFAAKQTDHPRLTADEFQEVN R
Specific function: Unknown
COG id: COG2442
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9096; Mature: 8965
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLARITIDPEVLHGRPCIRGMRISVADVLALLSSGASRDEILDDYPYLENADIDAVL CCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHH AFAAKQTDHPRLTADEFQEVNR HHHHCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SDLLARITIDPEVLHGRPCIRGMRISVADVLALLSSGASRDEILDDYPYLENADIDAVL CCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHH AFAAKQTDHPRLTADEFQEVNR HHHHCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA