Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192291533

Identifier: 192291533

GI number: 192291533

Start: 3406325

End: 3407245

Strand: Reverse

Name: 192291533

Synonym: Rpal_3159

Alternate gene names: NA

Gene position: 3407245-3406325 (Counterclockwise)

Preceding gene: 192291534

Following gene: 192291528

Centisome position: 59.32

GC content: 52.88

Gene sequence:

>921_bases
ATGAGTGGACGATTGATTGAGATCTTCCTGCCTGACTCAGAAATTCCAACTTACCGACACGGCCGGATTGCGAACAGAGC
GATCCAAGCGGTTACCGCAGCACGATCGGAGCTAAATCGCCTCACAAGTGAAGAGGCCGGTCGAGGGGGGCTCTATCTCC
TAGTCAACGATGATGAAGAAAGCGGAGTCAGTGTATACGTTGGCCGCAGCGAGAATGTTGCTGCACGATTAGCTGATCAC
AATCGGGGCTCAAATGTGATCGATGGAGACGGTGCCCCAGCTGACTTCTCCCGCGTTATCGTATTCTTTGGGGATGATTG
GCAAACTGTTGCTCACCTGATGTGGCTCGAAGCTAAGCTGATCGAGGCAATGCGAGCGGTCTCGTGGGTGACTGTTCTAA
ACAAAAGGCAAGAGCAAGCTCCGAATCTAAATCCGGCACAAGCGTCTATAGCAACGGAGGTGTTTGAGGATATTCGGCTC
TTGATGCCTGTACTCGGTCTCGACGTCTTGGAGAGAATTTCACCTTCGATCAAGACTTCCCACCAGCAGGCGGATGAAAA
TGGTCAGGAAAGGGAATCTCCCGAGGGCGAATCGTTTGAGTTGGATTTCGCCGGCATTCACGCTAACATCGTAGTTGATG
GTGATCGCTTCATCGCTCTCTCCGGCAGTGGATTTTCCTTGAACGAAGCCGATGCGCTACAAAGTAGTTACAAGCACTTA
CGAAGTCGCCTGCTAACCGATGGGGGCGTTTCTAGAAGCGGCGAAGGGGCAGTTTTATCCAAGGATGTAGAGTTCCGCTC
TGCTTCCGCGGTTGGATCCACTCTAACAGGTCAGCCGCTTCAGGCGCTGGATCGGATCGTTCGCAGTCGCGACAAACAAT
CACTTCGGCAGTGGCTTGCTGCCAAAACCCCCACGGTCTGA

Upstream 100 bases:

>100_bases
TGCCGACATCGATGCGGTCCTGGCCTTCGCGGCTAAGCAGACCGATCATCCGCGCCTGACGGCAGATGAATTCCAAGAAG
TAAATCGCTGAGAAAGCGCC

Downstream 100 bases:

>100_bases
CGTCTAAGCTGCCAAAGGACGAGGTGCGGAGATCGCCTTTAGCTCTACTTCCCGCAATTCCAGATCGGACCAATCGGCGT
CTGCGTCCAGCACGGCCCGA

Product: methionine sulfoxide reductase A

Products: NA

Alternate protein names: Peptide-Methionine-S-Oxide Reductase

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADH
NRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRL
LMPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL
RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV

Sequences:

>Translated_306_residues
MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADH
NRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRL
LMPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL
RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV
>Mature_305_residues
SGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADHN
RGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLL
MPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHLR
SRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33411; Mature: 33280

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEE
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
SGVSVYVGRSENVAARLADHNRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKL
CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
IEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLLMPVLGLDVLERISPSIKTS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL
HHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHH
RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLA
HHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AKTPTV
HCCCCC
>Mature Secondary Structure 
SGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEE
CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
SGVSVYVGRSENVAARLADHNRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKL
CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
IEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLLMPVLGLDVLERISPSIKTS
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL
HHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHH
RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLA
HHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AKTPTV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA