| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291533
Identifier: 192291533
GI number: 192291533
Start: 3406325
End: 3407245
Strand: Reverse
Name: 192291533
Synonym: Rpal_3159
Alternate gene names: NA
Gene position: 3407245-3406325 (Counterclockwise)
Preceding gene: 192291534
Following gene: 192291528
Centisome position: 59.32
GC content: 52.88
Gene sequence:
>921_bases ATGAGTGGACGATTGATTGAGATCTTCCTGCCTGACTCAGAAATTCCAACTTACCGACACGGCCGGATTGCGAACAGAGC GATCCAAGCGGTTACCGCAGCACGATCGGAGCTAAATCGCCTCACAAGTGAAGAGGCCGGTCGAGGGGGGCTCTATCTCC TAGTCAACGATGATGAAGAAAGCGGAGTCAGTGTATACGTTGGCCGCAGCGAGAATGTTGCTGCACGATTAGCTGATCAC AATCGGGGCTCAAATGTGATCGATGGAGACGGTGCCCCAGCTGACTTCTCCCGCGTTATCGTATTCTTTGGGGATGATTG GCAAACTGTTGCTCACCTGATGTGGCTCGAAGCTAAGCTGATCGAGGCAATGCGAGCGGTCTCGTGGGTGACTGTTCTAA ACAAAAGGCAAGAGCAAGCTCCGAATCTAAATCCGGCACAAGCGTCTATAGCAACGGAGGTGTTTGAGGATATTCGGCTC TTGATGCCTGTACTCGGTCTCGACGTCTTGGAGAGAATTTCACCTTCGATCAAGACTTCCCACCAGCAGGCGGATGAAAA TGGTCAGGAAAGGGAATCTCCCGAGGGCGAATCGTTTGAGTTGGATTTCGCCGGCATTCACGCTAACATCGTAGTTGATG GTGATCGCTTCATCGCTCTCTCCGGCAGTGGATTTTCCTTGAACGAAGCCGATGCGCTACAAAGTAGTTACAAGCACTTA CGAAGTCGCCTGCTAACCGATGGGGGCGTTTCTAGAAGCGGCGAAGGGGCAGTTTTATCCAAGGATGTAGAGTTCCGCTC TGCTTCCGCGGTTGGATCCACTCTAACAGGTCAGCCGCTTCAGGCGCTGGATCGGATCGTTCGCAGTCGCGACAAACAAT CACTTCGGCAGTGGCTTGCTGCCAAAACCCCCACGGTCTGA
Upstream 100 bases:
>100_bases TGCCGACATCGATGCGGTCCTGGCCTTCGCGGCTAAGCAGACCGATCATCCGCGCCTGACGGCAGATGAATTCCAAGAAG TAAATCGCTGAGAAAGCGCC
Downstream 100 bases:
>100_bases CGTCTAAGCTGCCAAAGGACGAGGTGCGGAGATCGCCTTTAGCTCTACTTCCCGCAATTCCAGATCGGACCAATCGGCGT CTGCGTCCAGCACGGCCCGA
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Peptide-Methionine-S-Oxide Reductase
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADH NRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRL LMPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV
Sequences:
>Translated_306_residues MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADH NRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRL LMPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV >Mature_305_residues SGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEESGVSVYVGRSENVAARLADHN RGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKLIEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLL MPVLGLDVLERISPSIKTSHQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHLR SRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLAAKTPTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33411; Mature: 33280
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEE CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC SGVSVYVGRSENVAARLADHNRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKL CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH IEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLLMPVLGLDVLERISPSIKTS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL HHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHH RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLA HHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH AKTPTV HCCCCC >Mature Secondary Structure SGRLIEIFLPDSEIPTYRHGRIANRAIQAVTAARSELNRLTSEEAGRGGLYLLVNDDEE CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC SGVSVYVGRSENVAARLADHNRGSNVIDGDGAPADFSRVIVFFGDDWQTVAHLMWLEAKL CCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH IEAMRAVSWVTVLNKRQEQAPNLNPAQASIATEVFEDIRLLMPVLGLDVLERISPSIKTS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HQQADENGQERESPEGESFELDFAGIHANIVVDGDRFIALSGSGFSLNEADALQSSYKHL HHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHH RSRLLTDGGVSRSGEGAVLSKDVEFRSASAVGSTLTGQPLQALDRIVRSRDKQSLRQWLA HHHHHCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHH AKTPTV HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA