| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291500
Identifier: 192291500
GI number: 192291500
Start: 3371068
End: 3371535
Strand: Reverse
Name: 192291500
Synonym: Rpal_3124
Alternate gene names: NA
Gene position: 3371535-3371068 (Counterclockwise)
Preceding gene: 192291501
Following gene: 192291499
Centisome position: 58.7
GC content: 63.03
Gene sequence:
>468_bases ATGCGAAAAGCAATCACATCCCTGGCGACCGCTGCCTTGCTAATCGGATCGGCGACCGTCGGCCCCGCAATTGCCCGCGA TCGCTCTGACCGCGCCGACCGTGTGGAATTGACCACAAGCCAACTCACCGATCAGGCGGTTGCCCGCGCAGCTCAGCTCA AAGCTGACCTTCGTCTCACGCCGGAGCAGGACAAGAACTGGGCGGGCGTCCAGGGCGCGCTGGTCGACGTCTGGAGGAAG CGGGCCGAAGAGCGCCAATCCTGGCGGAACGCGCGCGCCAATGCGACAGGCAGCACCGATCTGATCGAGCAGATGCGCAA GACTGGCGACGATCAGATCGAACGCGGCAATAATCTGAAGAAGCTCGCCGATGCGGCTCAGCCGCTGTACGCATCACTCG ACGATCAGCAGAAGCGGCGCTTCACCGAGGCGTTGTTTCAACGGCATCGCGATCGCCGCTCGGATTGA
Upstream 100 bases:
>100_bases GAAAGCTCTGATCGCAGATCCGCGCGACATCTCTCGTCGCTTCCCGAGACTACGGCAGGCACTCAACGATACAAGCTCAA CTCCAAAAAAGGAACGCGCT
Downstream 100 bases:
>100_bases GCTAAAGATCGCTCGAGCAGTTTCGCAATAGCGGGCGTCCTCTGGATGGCCCGCTATTCGTCCTTTTTGATGCGGCGATC GAGGCGAAACATGCAGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD
Sequences:
>Translated_155_residues MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD >Mature_155_residues MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17385; Mature: 17385
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLT CHHHHHHHHHHHHHHHCHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEQDKNWAGVQGALVDVWRKRAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCHH KLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLT CHHHHHHHHHHHHHHHCHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEQDKNWAGVQGALVDVWRKRAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCHH KLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA