| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yeaX [C]
Identifier: 192291499
GI number: 192291499
Start: 3369640
End: 3370977
Strand: Reverse
Name: yeaX [C]
Synonym: Rpal_3123
Alternate gene names: 192291499
Gene position: 3370977-3369640 (Counterclockwise)
Preceding gene: 192291500
Following gene: 192291497
Centisome position: 58.69
GC content: 63.15
Gene sequence:
>1338_bases ATGCAGACCGTGAGATTGAAGGTGGCGTTCGCCGGGGTAATCGGTGGTCTGTCGGGCCTGTGGCTCCTCAGCCTGGCCCC CGACGCATGGCAGCAAGGTTTCTGGGAGACCCGCGCGACGCTGGTCTATGGCTGCGGCGTGCTCGCGCTGGGGCTGATGT CCGTCGGCGTGATCCTGGCCGCCCGGCCGGTTTGGTTCGAAACGCCGCTGGGAGGCCTCGACAAGTTCTATCGCCTACAT CGATGGCTGGGGATTTCGGCGCTGGGATTTGCGCTGGTGCACTGGCTGCTGCGCGAGGGGCCGTCCTGGATCACGGAGCT CGGTCTGGTCGCGCTCCCGCCGAAGCCGGCGCACCCGCAAGAAGACGCAGCCCTGGGCTTCGATCTGTTTCGTGATCTGA AGCATCCCGCCGCCGAGGTCGGTGAATGGGCGCTCTATGCCCTCGTCGTCCTGGTTGCGATAGCCTTGTGGAAACGGTTT CCCTACAAATACTTCTTCTGGACGCATCGGTTGATGCCGCTCGTCTATCTGGCGCTGGTGTTTCACGCCTTCATTCTGAT CGACAAGAGCTACTGGACCAAGCCGCTCGGGCCGGTGCTGGCGTGTCTGTTGATCGCCGGGACGGTCGCCGCCGTGATTG CGCTGTTTCGACGGATCGGCAGTTCACGAAAGGCATCGGGTACGATCGCGACGCTGTCGCTTTACGACGACAATCAAATG CTCGAGGTCGGCGTCCGGCTCGAAACGGCATGGCGTGGCCACGAGGCCGGTCAGTTCGCCTTCGTGGATTTCGACGACGC CGAGGCTGCGCATCCCTTCACGATCTCGTCCTCCTGGCAAAATGAAGGGCTGTTGATGTTCTCGATCAAGGGACTCGGCG ACTACACGCGAAGCCTGGCGGGCAGCCTGCATGTGGGGCAGGGCGTCGTTGTCGAGGGGCCGTATGGCCGGTTCAATTTT GAGGACGACAGCGGCCGGCAGATCTGGATCGGCGGCGGCGTGGGCGTCACGCCGTTCATCGCCCGGCTGAAGCAACTGGT GGGAGGCGGGCAGTCCAATCCGGTTGATTTGTTCTACGCCACCGATACGCCCGACCCCGGCTTTGTCGCTCCGATCGCGC AACTGGCCCGCCAGTCGGGGATCGCTTTTCATGTCGTGGACGGATCGCAAGGCGACCGCCTGACGCTTGAAAAACTCGCG GCCCTGGTGCCCGAATGGAAGCAAGCGGACGTCTGGTTTTGTGGCCCAAGCGGATTTGGTGATGCGATGCGTCGCGCGAT GATGGCGCAAGGACTGCCGGCGTCGCGTTTCCATCAGGAATCGTTCGAGATGCGGTGA
Upstream 100 bases:
>100_bases CTCGGATTGAGCTAAAGATCGCTCGAGCAGTTTCGCAATAGCGGGCGTCCTCTGGATGGCCCGCTATTCGTCCTTTTTGA TGCGGCGATCGAGGCGAAAC
Downstream 100 bases:
>100_bases TCGACCGTCTTCGTTCACCGGCCCGGAAGGTCCGCCGATCATCCGGGCGACAAGGGAAGGGTGCAGGGCGACGATAATAG CTAGGACGATAACTAGATCG
Product: Ferric reductase transmembrane protein domain-containing protein
Products: NA
Alternate protein names: Ferric Reductase Domain-Containing Protein; Flavodoxin Oxidoreductase; Ferric Reductase-Like Transmembrane Component-Like; Flavocytochrome; Ferric Reductase; Ferric Reductase Domain Protein Transmembrane Component; Membrane Flavodoxin Oxidoreductase; Oxidoreductase Membrane Protein; Membrane-Bound Oxidoreductase; Flavocytochrome Protein; Vanillate O-Demethylase Oxidoreductase; Hmp Protein; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGCGVLALGLMSVGVILAARPVWFETPLGGLDKFYRLH RWLGISALGFALVHWLLREGPSWITELGLVALPPKPAHPQEDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRF PYKYFFWTHRLMPLVYLALVFHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSSRKASGTIATLSLYDDNQM LEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQNEGLLMFSIKGLGDYTRSLAGSLHVGQGVVVEGPYGRFNF EDDSGRQIWIGGGVGVTPFIARLKQLVGGGQSNPVDLFYATDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKLA ALVPEWKQADVWFCGPSGFGDAMRRAMMAQGLPASRFHQESFEMR
Sequences:
>Translated_445_residues MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGCGVLALGLMSVGVILAARPVWFETPLGGLDKFYRLH RWLGISALGFALVHWLLREGPSWITELGLVALPPKPAHPQEDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRF PYKYFFWTHRLMPLVYLALVFHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSSRKASGTIATLSLYDDNQM LEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQNEGLLMFSIKGLGDYTRSLAGSLHVGQGVVVEGPYGRFNF EDDSGRQIWIGGGVGVTPFIARLKQLVGGGQSNPVDLFYATDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKLA ALVPEWKQADVWFCGPSGFGDAMRRAMMAQGLPASRFHQESFEMR >Mature_445_residues MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGCGVLALGLMSVGVILAARPVWFETPLGGLDKFYRLH RWLGISALGFALVHWLLREGPSWITELGLVALPPKPAHPQEDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRF PYKYFFWTHRLMPLVYLALVFHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSSRKASGTIATLSLYDDNQM LEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQNEGLLMFSIKGLGDYTRSLAGSLHVGQGVVVEGPYGRFNF EDDSGRQIWIGGGVGVTPFIARLKQLVGGGQSNPVDLFYATDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKLA ALVPEWKQADVWFCGPSGFGDAMRRAMMAQGLPASRFHQESFEMR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 48836; Mature: 48836
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGCGVLALGLMSVGVILA CCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARPVWFETPLGGLDKFYRLHRWLGISALGFALVHWLLREGPSWITELGLVALPPKPAHPQ CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCC EDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRFPYKYFFWTHRLMPLVYLALV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSSRKASGTIATLSLYDDNQM HHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE LEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQNEGLLMFSIKGLGDYTRSLA EEECEEEEECCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHH GSLHVGQGVVVEGPYGRFNFEDDSGRQIWIGGGVGVTPFIARLKQLVGGGQSNPVDLFYA CCEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE TDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKLAALVPEWKQADVWFCGPSGFG CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEECCCCHH DAMRRAMMAQGLPASRFHQESFEMR HHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure MQTVRLKVAFAGVIGGLSGLWLLSLAPDAWQQGFWETRATLVYGCGVLALGLMSVGVILA CCEEEEEEEHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARPVWFETPLGGLDKFYRLHRWLGISALGFALVHWLLREGPSWITELGLVALPPKPAHPQ CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCC EDAALGFDLFRDLKHPAAEVGEWALYALVVLVAIALWKRFPYKYFFWTHRLMPLVYLALV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FHAFILIDKSYWTKPLGPVLACLLIAGTVAAVIALFRRIGSSRKASGTIATLSLYDDNQM HHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE LEVGVRLETAWRGHEAGQFAFVDFDDAEAAHPFTISSSWQNEGLLMFSIKGLGDYTRSLA EEECEEEEECCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHH GSLHVGQGVVVEGPYGRFNFEDDSGRQIWIGGGVGVTPFIARLKQLVGGGQSNPVDLFYA CCEECCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE TDTPDPGFVAPIAQLARQSGIAFHVVDGSQGDRLTLEKLAALVPEWKQADVWFCGPSGFG CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEECCCCHH DAMRRAMMAQGLPASRFHQESFEMR HHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA