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The map label for this gene is yiaO [C]

Identifier: 192291497

GI number: 192291497

Start: 3366555

End: 3367574

Strand: Reverse

Name: yiaO [C]

Synonym: Rpal_3121

Alternate gene names: 192291497

Gene position: 3367574-3366555 (Counterclockwise)

Preceding gene: 192291499

Following gene: 192291496

Centisome position: 58.63

GC content: 62.84

Gene sequence:

>1020_bases
ATGAGTTTTTCACGCAGGAGCTTGTTGAAGGCGTCGGCGGCGGCCGCCGCGATCGGCGGCATCGGTGCGCCTTGGGTGGC
GCGCGCCGCTGAGGCCGAATTCAAGTACAAATACGCCAACAACCTGCCCGACACCCATCCGCTCAACGTTCGCGCCCGCG
AGATGTCGGCGGCGATCAAGGCCGAGACCGACGGCAAGGTCCAGATCGACGTTTTCCCGAACAACCAGCTCGGCTCCGAC
ACCGACATGCTGAGCCAGATTCGCGCCGGCGGCGTCGAGTTCTTCACGCTGTCGGGCCTGATCCTGTCGACCCTGGTGCC
GGCAGCTTCGATCAACGGCATCGGCTTCGCATTCCCGGACTATGAGACGGTCTGGAAGGCCATGGATGGCGAGCTCGGCG
GCTATGTCCGCGGCGAGATCCAGAAGGCCGGCCTGATGGTGATGGACAAGATCTGGGACAACGGCTTCCGCCAGACCACG
TCGTCGACCAAGCCGATCAACGGCCCGGACGACTTCAAGGGCTTCAAGATTCGCGTGCCGGTGTCGCCGCTGTGGACCTC
GATGTTCAAGGCGTTCGATGCGGCCCCCGCCTCGATCAATTTCAGCGAAGTCTATTCGGCGCTGCAGACCAAGGTGGTCG
AAGGCCAAGAGAACCCGCTGGTGCTGATCTCGGCCGCCAAGCTGTACGAAGTCCAGAAGTACTGCTCGCTGACCAACCAC
ATGTGGGACGGCTTCTGGTTCCTGGCCAACCGCCGCGCCTGGGAAAAGCTGCCGCCGGACGTGCGCACGATTGTCGCCAA
GCACATCAACGCGGCTGCGGTAAAGGAACGCGAAGACACCGCCAAGCTCAACGCCACCGTCAAGGAAGAGCTGACCGCCA
AGGGGCTGATCTTCAATCAGCCGCCGGTGATGCCGTTCCGCGACAAGCTGCGCAGCGCCGGCTTCTATGCCGAGTGGAAA
GGCAAATACGGCGATCAGGCGTGGTCGCTGCTCGAGAAGTCAGTCGGCAAGCTGGCGTAA

Upstream 100 bases:

>100_bases
TCAAAATCGCTTGACCGGACCAGCCGAAATGATGACCAAGGGCGCGTCGACATTTCGGGTGCGTTCTCACAAAAAGACCA
CGCGGGCAGGAGGAAGCGAG

Downstream 100 bases:

>100_bases
CGGCTGGCCGACATGGCGAGCGCCGACGCTTCCCAGCTCACAGCCGGTGAACGGCTCCACGCGCCGCAGCGTAAAACGCT
GATCGGCGCGCTGGAGGCTG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDTHPLNVRAREMSAAIKAETDGKVQIDVFPNNQLGSD
TDMLSQIRAGGVEFFTLSGLILSTLVPAASINGIGFAFPDYETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTT
SSTKPINGPDDFKGFKIRVPVSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVLISAAKLYEVQKYCSLTNH
MWDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTAKLNATVKEELTAKGLIFNQPPVMPFRDKLRSAGFYAEWK
GKYGDQAWSLLEKSVGKLA

Sequences:

>Translated_339_residues
MSFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDTHPLNVRAREMSAAIKAETDGKVQIDVFPNNQLGSD
TDMLSQIRAGGVEFFTLSGLILSTLVPAASINGIGFAFPDYETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTT
SSTKPINGPDDFKGFKIRVPVSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVLISAAKLYEVQKYCSLTNH
MWDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTAKLNATVKEELTAKGLIFNQPPVMPFRDKLRSAGFYAEWK
GKYGDQAWSLLEKSVGKLA
>Mature_338_residues
SFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDTHPLNVRAREMSAAIKAETDGKVQIDVFPNNQLGSDT
DMLSQIRAGGVEFFTLSGLILSTLVPAASINGIGFAFPDYETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTTS
STKPINGPDDFKGFKIRVPVSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVLISAAKLYEVQKYCSLTNHM
WDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTAKLNATVKEELTAKGLIFNQPPVMPFRDKLRSAGFYAEWKG
KYGDQAWSLLEKSVGKLA

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=285, Percent_Identity=28.4210526315789, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 37341; Mature: 37210

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDTHPLNVRAREMSAAIK
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEHHCCCCCCCCCCEEHHHHHHHHE
AETDGKVQIDVFPNNQLGSDTDMLSQIRAGGVEFFTLSGLILSTLVPAASINGIGFAFPD
ECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCHHCCCCCEECCCC
YETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTTSSTKPINGPDDFKGFKIRVP
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEC
VSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVLISAAKLYEVQKYCSLTNH
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
MWDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTAKLNATVKEELTAKGLIFNQ
HCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECC
PPVMPFRDKLRSAGFYAEWKGKYGDQAWSLLEKSVGKLA
CCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSRRSLLKASAAAAAIGGIGAPWVARAAEAEFKYKYANNLPDTHPLNVRAREMSAAIK
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEHHCCCCCCCCCCEEHHHHHHHHE
AETDGKVQIDVFPNNQLGSDTDMLSQIRAGGVEFFTLSGLILSTLVPAASINGIGFAFPD
ECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCHHCCCCCEECCCC
YETVWKAMDGELGGYVRGEIQKAGLMVMDKIWDNGFRQTTSSTKPINGPDDFKGFKIRVP
HHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEC
VSPLWTSMFKAFDAAPASINFSEVYSALQTKVVEGQENPLVLISAAKLYEVQKYCSLTNH
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHH
MWDGFWFLANRRAWEKLPPDVRTIVAKHINAAAVKEREDTAKLNATVKEELTAKGLIFNQ
HCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECC
PPVMPFRDKLRSAGFYAEWKGKYGDQAWSLLEKSVGKLA
CCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]