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The map label for this gene is yccU [H]

Identifier: 192291479

GI number: 192291479

Start: 3347986

End: 3348570

Strand: Reverse

Name: yccU [H]

Synonym: Rpal_3103

Alternate gene names: 192291479

Gene position: 3348570-3347986 (Counterclockwise)

Preceding gene: 192291480

Following gene: 192291478

Centisome position: 58.3

GC content: 62.91

Gene sequence:

>585_bases
ATGAACCACGACAGCTACTCCGACAATTACATCCGCGCGATCCTGAATGGTGTGAAGACGATTGCGATGGTCGGGGCGTC
GCCGCTCAACGTGCGGCCGAGCTACTTCGTGTTCAAATATCTTAGCGAGCGCGGCTACGACGTCATTCCGATCAATCCCG
GTCAGGTCGGCAAGAGCCTGCTCGGCAAGCCGTTCGTGGCGTCACTCAAGGACATCGACCGGCCGATCGACATGGTCGAC
GTGTTCCGCGGCTCCGCGCATGTGTTGCCGGTGGTCGACGAGGTGTTGTCGCTGTCGCCGCTGCCGAAAGTAATCTGGAT
GCAGATCGGGGTGCGCAACGATGAAGCCGCCGCGAAGGCCGAAGCCGCCGGCCTCAAGGTGGTGATGGATCGCTGCCCGA
AGATCGAATACGGCCGGCTGTCGTCCGAGATTTCCTGGATGGGGGTGAACTCGCGCACCCTCAGCGCCAAACGCGCGCCG
ATCCCGGTCAAAGGGATGCGGCTGTCGCTCGATCGTCAGAGCGTCGCCGGCGCCGATACCGCCGCGTCCGACCGCGCCGT
CAAAAGCCGCAATGAAGCGGTCTGA

Upstream 100 bases:

>100_bases
AGGGCCAAGCACCGGAAGCTGGATTGCTTCGTCGCGGAGCCTGTGCTCGGACGCCGCGAAGTGGCGATCCGAGTGCTCCT
CGCAATGACGGACTTGTCAG

Downstream 100 bases:

>100_bases
ACGCTGCAGCACGCCTGCCCCGCCTGCGCTTGACCTGGTCCGGGGTTCCGATCAGATAGCCTAAACCATCAGCCACAGTA
CGGAGGGATCGATCATGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSLLGKPFVASLKDIDRPIDMVD
VFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKAEAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAP
IPVKGMRLSLDRQSVAGADTAASDRAVKSRNEAV

Sequences:

>Translated_194_residues
MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSLLGKPFVASLKDIDRPIDMVD
VFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKAEAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAP
IPVKGMRLSLDRQSVAGADTAASDRAVKSRNEAV
>Mature_194_residues
MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSLLGKPFVASLKDIDRPIDMVD
VFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKAEAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAP
IPVKGMRLSLDRQSVAGADTAASDRAVKSRNEAV

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=131, Percent_Identity=49.618320610687, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 21128; Mature: 21128

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHH
LGKPFVASLKDIDRPIDMVDVFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKA
HCCCHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEHHEECCCCCHHHHHH
EAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAPIPVKGMRLSLDRQSVAGADT
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCC
AASDRAVKSRNEAV
CHHHHHHHHCCCCC
>Mature Secondary Structure
MNHDSYSDNYIRAILNGVKTIAMVGASPLNVRPSYFVFKYLSERGYDVIPINPGQVGKSL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHH
LGKPFVASLKDIDRPIDMVDVFRGSAHVLPVVDEVLSLSPLPKVIWMQIGVRNDEAAAKA
HCCCHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEHHEECCCCCHHHHHH
EAAGLKVVMDRCPKIEYGRLSSEISWMGVNSRTLSAKRAPIPVKGMRLSLDRQSVAGADT
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCC
AASDRAVKSRNEAV
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]