| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291462
Identifier: 192291462
GI number: 192291462
Start: 3329263
End: 3329580
Strand: Reverse
Name: 192291462
Synonym: Rpal_3086
Alternate gene names: NA
Gene position: 3329580-3329263 (Counterclockwise)
Preceding gene: 192291465
Following gene: 192291458
Centisome position: 57.97
GC content: 65.09
Gene sequence:
>318_bases ATGCTGGCCGCCACCCTTCAGACTGCGGCGTTTCTGTTCCTGCTGCTGGTCGCGCTTCTGGTGTTTTCGGTGTTCGTCGC CTTCACGGCGCCGGCGCTGACCAAGTCGCCGAAGCCCGGCTTCACCACGGTGCTGATGTATTTCGCCGCCGAGCTCGCCG CGTTGATCGTGGCGATCTGGATCGTGGCCGAGGTGTCGTCGTTCGAACTGTTGCCGGTGTTGATCGCGCTGGCGATCGCC GCGGTGGTGTTCGCCCCGCAGCTCGTCGCCAAGATCCCGCTGCCGGAGCCGGTCGCCGGATTTCTCGGACGCAAGTAA
Upstream 100 bases:
>100_bases TCGTCGTCAGGCGCGTCCCGGACAGCGCCACGCTTTTGCGATTCGGCGAATTGCCCTAGTCTTGCAGGCAGATTCAGTCG ATCCTTATGGAGTCCCGATC
Downstream 100 bases:
>100_bases TCCCGCTGCGGAGCCTGCCCGCGCCGCGCGGCGGGCCAGGCCAAGCAGAGCTCGCCACGATGCTGGAAAACCGCCCTTCG GGGCGGTTTTCGTTTGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MLAATLQTAAFLFLLLVALLVFSVFVAFTAPALTKSPKPGFTTVLMYFAAELAALIVAIWIVAEVSSFELLPVLIALAIA AVVFAPQLVAKIPLPEPVAGFLGRK
Sequences:
>Translated_105_residues MLAATLQTAAFLFLLLVALLVFSVFVAFTAPALTKSPKPGFTTVLMYFAAELAALIVAIWIVAEVSSFELLPVLIALAIA AVVFAPQLVAKIPLPEPVAGFLGRK >Mature_105_residues MLAATLQTAAFLFLLLVALLVFSVFVAFTAPALTKSPKPGFTTVLMYFAAELAALIVAIWIVAEVSSFELLPVLIALAIA AVVFAPQLVAKIPLPEPVAGFLGRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11057; Mature: 11057
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAATLQTAAFLFLLLVALLVFSVFVAFTAPALTKSPKPGFTTVLMYFAAELAALIVAIW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IVAEVSSFELLPVLIALAIAAVVFAPQLVAKIPLPEPVAGFLGRK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MLAATLQTAAFLFLLLVALLVFSVFVAFTAPALTKSPKPGFTTVLMYFAAELAALIVAIW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IVAEVSSFELLPVLIALAIAAVVFAPQLVAKIPLPEPVAGFLGRK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA