Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is wcaJ [H]

Identifier: 192291465

GI number: 192291465

Start: 3331756

End: 3333312

Strand: Reverse

Name: wcaJ [H]

Synonym: Rpal_3089

Alternate gene names: 192291465

Gene position: 3333312-3331756 (Counterclockwise)

Preceding gene: 192291466

Following gene: 192291462

Centisome position: 58.03

GC content: 64.8

Gene sequence:

>1557_bases
ATGGAGCCGATCAGCGCACGTTCGATGATCAGTGCTGCTGCGACGGAAGCCGTGGTCGCCAGCGGCGACGGCGCGCCGCG
GGTGGAACGCCGCAAGCGGTTGTCGCCGGCCGCCCTCGCCGTCGCCAATCAGAAGGTGCCGCCGGCGTTTTCGCCGATCG
TGATCGCCGGCTCCGTCCGCCTCGCCGATTTTCTCGTGATCGCCGCCGTCGGCATCGCGCTGTACTTCGCGCTCGTGGTC
CGCCGCGACGGCTTTGCCTGGGAGTACATCGCGGCGATCATCGGCACCACGGCGACTGCGGTCGTCGCGTTCCAGGCTGC
CGATCTTTACAAGGTGCAACTGTTCCGCGGCACCTTGAAACAGATGACCCGGATCATATCGACGTGGTCGATCGTGTTCC
TGCTGTTCATCGGCGCATCGTTCTTCGCCAAGCTCGGCGGCGAGGTGTCGCGGCTGTGGCTGGGTTCGTTCTTTTTCGCC
GGCCTCGCCTTGCTGATCATCGAGCGATTGTCGGTGCGCGCGCTGGTGCGGCGCTGGGCGTCGCAAGGCCGGCTCGACCG
CCGCACCGTGATCGTCGGTGCCGACGCTAATGGCGCCAAGCTGATCGAAGCGCTGAAGGCCGAGCACGCCGACGCCTCCG
ACATCCGTATCCTCGGCGTGTTCGACGACCGCAACGACGCCCGCTCGCAGTCCACTTGCGCGGGCGTTCCGAAGCTCGGC
AAGGTCGATGACATTCCCGAATTCGCCCGCCGCACCCGTGTCGATCTCGTGCTGTTCGCGCTGCCGATCTCGGCCGAGAC
CCGCATCCTCGACATGCTGAAGAAGCTGTGGGTGCTGCCGGTTGACATCCGGCTGTCGGCGCACACCAACAAGCTGCGGT
TCCGGCCGCGCGCCTATTCCTATGTCGGCAAGGTGCCGACGCTCGACGTGTTCGAAGCGCCGATCACCGATTGGGATCAG
GTGATCAAGCAGGTATTCGACCGCGTCGTCGGCGGTTTCATCCTGCTGCTCGCCGCCCCGGTAATGGCTTTGGTAGCGCT
GGCGATCAAGCTCGACAGCCCGGGTCCTGTGCTGTTCCGGCAGAAGCGGTTCGGCTTCAACAACGAGCGCATCGACGTGC
TCAAGTTTCGGTCGATGTATCACGACCAGGCCGATCCCACTGCGTCAAAGGTCGTCACCCGCAACGACCCGCGCGTCACC
CGGGTCGGCCGCTTCATCCGCCGCACCAGCCTCGACGAGCTGCCGCAACTGTTCAACGTGGTGTTCAAGGGCAATCTGTC
GCTGGTCGGCCCGCGCCCGCATGCGGTGCAGGGCAAGCTGCAGAGCCAGCTGTTCGACGAAGCCGTCGACGGCTACTTCG
CCCGCCACCGCGTCAAGCCGGGTATCACCGGCTGGGCCCAGATCAACGGCTGGCGCGGCGAGATCGACAACGAAGAGAAG
ATCCAGAAGCGCGTCGAGTTCGACCTGTACTACATCGAGAACTGGTCGGTCCTGTTTGACCTCTACATTCTGCTGAGAAC
TCCGTGGGCGCTGCTCAAGGGCGAGAACGCGTACTGA

Upstream 100 bases:

>100_bases
TCGCCGCTAACCGTTTCTTGCGACTTTTCCGTTAATGCCCGGACTGGGGGAGTTCGCCGGACGACAAAGTCGTGCCGGCG
CAACAGACGGACATGGACAG

Downstream 100 bases:

>100_bases
GGCGTTCGTTTTAAGCACTTTCCCCACACCGTCATTCCGGGGCGCCGCGCAGCGGCGAACCCGGAATCCCGAGATTGTGG
AAACGCCGTGCCTCACCACA

Product: undecaprenyl-phosphate glucose phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MEPISARSMISAAATEAVVASGDGAPRVERRKRLSPAALAVANQKVPPAFSPIVIAGSVRLADFLVIAAVGIALYFALVV
RRDGFAWEYIAAIIGTTATAVVAFQAADLYKVQLFRGTLKQMTRIISTWSIVFLLFIGASFFAKLGGEVSRLWLGSFFFA
GLALLIIERLSVRALVRRWASQGRLDRRTVIVGADANGAKLIEALKAEHADASDIRILGVFDDRNDARSQSTCAGVPKLG
KVDDIPEFARRTRVDLVLFALPISAETRILDMLKKLWVLPVDIRLSAHTNKLRFRPRAYSYVGKVPTLDVFEAPITDWDQ
VIKQVFDRVVGGFILLLAAPVMALVALAIKLDSPGPVLFRQKRFGFNNERIDVLKFRSMYHDQADPTASKVVTRNDPRVT
RVGRFIRRTSLDELPQLFNVVFKGNLSLVGPRPHAVQGKLQSQLFDEAVDGYFARHRVKPGITGWAQINGWRGEIDNEEK
IQKRVEFDLYYIENWSVLFDLYILLRTPWALLKGENAY

Sequences:

>Translated_518_residues
MEPISARSMISAAATEAVVASGDGAPRVERRKRLSPAALAVANQKVPPAFSPIVIAGSVRLADFLVIAAVGIALYFALVV
RRDGFAWEYIAAIIGTTATAVVAFQAADLYKVQLFRGTLKQMTRIISTWSIVFLLFIGASFFAKLGGEVSRLWLGSFFFA
GLALLIIERLSVRALVRRWASQGRLDRRTVIVGADANGAKLIEALKAEHADASDIRILGVFDDRNDARSQSTCAGVPKLG
KVDDIPEFARRTRVDLVLFALPISAETRILDMLKKLWVLPVDIRLSAHTNKLRFRPRAYSYVGKVPTLDVFEAPITDWDQ
VIKQVFDRVVGGFILLLAAPVMALVALAIKLDSPGPVLFRQKRFGFNNERIDVLKFRSMYHDQADPTASKVVTRNDPRVT
RVGRFIRRTSLDELPQLFNVVFKGNLSLVGPRPHAVQGKLQSQLFDEAVDGYFARHRVKPGITGWAQINGWRGEIDNEEK
IQKRVEFDLYYIENWSVLFDLYILLRTPWALLKGENAY
>Mature_518_residues
MEPISARSMISAAATEAVVASGDGAPRVERRKRLSPAALAVANQKVPPAFSPIVIAGSVRLADFLVIAAVGIALYFALVV
RRDGFAWEYIAAIIGTTATAVVAFQAADLYKVQLFRGTLKQMTRIISTWSIVFLLFIGASFFAKLGGEVSRLWLGSFFFA
GLALLIIERLSVRALVRRWASQGRLDRRTVIVGADANGAKLIEALKAEHADASDIRILGVFDDRNDARSQSTCAGVPKLG
KVDDIPEFARRTRVDLVLFALPISAETRILDMLKKLWVLPVDIRLSAHTNKLRFRPRAYSYVGKVPTLDVFEAPITDWDQ
VIKQVFDRVVGGFILLLAAPVMALVALAIKLDSPGPVLFRQKRFGFNNERIDVLKFRSMYHDQADPTASKVVTRNDPRVT
RVGRFIRRTSLDELPQLFNVVFKGNLSLVGPRPHAVQGKLQSQLFDEAVDGYFARHRVKPGITGWAQINGWRGEIDNEEK
IQKRVEFDLYYIENWSVLFDLYILLRTPWALLKGENAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=460, Percent_Identity=33.0434782608696, Blast_Score=238, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 57767; Mature: 57767

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPISARSMISAAATEAVVASGDGAPRVERRKRLSPAALAVANQKVPPAFSPIVIAGSVR
CCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCHH
LADFLVIAAVGIALYFALVVRRDGFAWEYIAAIIGTTATAVVAFQAADLYKVQLFRGTLK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QMTRIISTWSIVFLLFIGASFFAKLGGEVSRLWLGSFFFAGLALLIIERLSVRALVRRWA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGRLDRRTVIVGADANGAKLIEALKAEHADASDIRILGVFDDRNDARSQSTCAGVPKLG
HCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCC
KVDDIPEFARRTRVDLVLFALPISAETRILDMLKKLWVLPVDIRLSAHTNKLRFRPRAYS
CCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHEECEEEEEECCCCCEEECCHHHH
YVGKVPTLDVFEAPITDWDQVIKQVFDRVVGGFILLLAAPVMALVALAIKLDSPGPVLFR
HHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
QKRFGFNNERIDVLKFRSMYHDQADPTASKVVTRNDPRVTRVGRFIRRTSLDELPQLFNV
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCEECCCCCHHHHHHHHHHCCHHHHHHHHHH
VFKGNLSLVGPRPHAVQGKLQSQLFDEAVDGYFARHRVKPGITGWAQINGWRGEIDNEEK
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
IQKRVEFDLYYIENWSVLFDLYILLRTPWALLKGENAY
HHHHHHEEEEEEECHHHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MEPISARSMISAAATEAVVASGDGAPRVERRKRLSPAALAVANQKVPPAFSPIVIAGSVR
CCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCHH
LADFLVIAAVGIALYFALVVRRDGFAWEYIAAIIGTTATAVVAFQAADLYKVQLFRGTLK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QMTRIISTWSIVFLLFIGASFFAKLGGEVSRLWLGSFFFAGLALLIIERLSVRALVRRWA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQGRLDRRTVIVGADANGAKLIEALKAEHADASDIRILGVFDDRNDARSQSTCAGVPKLG
HCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCC
KVDDIPEFARRTRVDLVLFALPISAETRILDMLKKLWVLPVDIRLSAHTNKLRFRPRAYS
CCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHEECEEEEEECCCCCEEECCHHHH
YVGKVPTLDVFEAPITDWDQVIKQVFDRVVGGFILLLAAPVMALVALAIKLDSPGPVLFR
HHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
QKRFGFNNERIDVLKFRSMYHDQADPTASKVVTRNDPRVTRVGRFIRRTSLDELPQLFNV
HHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCEECCCCCHHHHHHHHHHCCHHHHHHHHHH
VFKGNLSLVGPRPHAVQGKLQSQLFDEAVDGYFARHRVKPGITGWAQINGWRGEIDNEEK
HHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
IQKRVEFDLYYIENWSVLFDLYILLRTPWALLKGENAY
HHHHHHEEEEEEECHHHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]