| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291409
Identifier: 192291409
GI number: 192291409
Start: 3291725
End: 3292738
Strand: Reverse
Name: 192291409
Synonym: Rpal_3033
Alternate gene names: NA
Gene position: 3292738-3291725 (Counterclockwise)
Preceding gene: 192291410
Following gene: 192291408
Centisome position: 57.32
GC content: 68.54
Gene sequence:
>1014_bases ATGAACGCAATCGTCACTCTCGACAGCATTCTTGAGCCGCCGGCGGGGACGCCTGCGCTGACCGCCGCCGACCTGTTCGG TACCGGGAACGTCGCGCAGATCGTTGACGCGATTGAGGCACAGGTTCGCGCCGAGGCGTTCGATGTCGCGACCGAGGCCG GGCGCAAGCATATCAAATCGGTCGCCTACAAGGTCGCCCGATCGAAGACCATCTTGGACGAGATCGGCAAGGAACACGTT GCCGAGATCAAGAAGCAGTCGGCAGCAATCGACGCCGAGCGAAAAACCGTGCGCGACCGCCTGGACGCCCTCAAGGGAGA GATCATCCGCCCGGTGGACGATTGGGAATCTGCCGAGGCTGAGCGCATCAGCGGCCACGAAAACGCGCTGGTTGCCATCG TGGAGGCCGGGCGCGGCGAAGGGCGCGGCGTCTACCGCACGCCGGCCGACATCAGCGCCGCGATCGAGCACGTCCGGAAG CTTTGCCGGCGCGACTGGCAGGAATTCCATGAACGCGCCGAAGCCGCAGCAAGCGAAGCCCTTTCCAAACTGGAAGCGGC TCTAGCCGCCGCAGAGCAGGCAGAGGCCGAGCGCGCCGAGCTGGAAGCCCTGCGGCGCGAGAAGGCCGAGCGCGACGCTG CGGACGCCGCCGAGCGCCAGCGGGTCGCCCAGGAGCAGGCCGAGGCCGAACGCAAGGCCCATGCCGAGCAGCAGGAGCGC GAGCGTGCAGCGCAGCTCGCCGCCTGGAAGGCCGAGCAGGAGGCAAAGGCAAAGCAGCAGGCCGAGGAAGCCGCCGCACG GGCCGTCGATCAGGAGCGCGCCCGCGTCGCCGCCGAGACCGCCGAGCGCGAGGCCGCGGAGCGCAAGCGCGCCGACAACA AGCGCCGGCGCGACAAGGTGCACGCTGAGATCAGGCAGTTCCTCGCCGCGGAACTGGTCGCGCCGGAAGTGGCCGACCGC CTGATTGACGCCATCACCGCCGGCCGCATCCCCCACCTGTCTATCACCTACTGA
Upstream 100 bases:
>100_bases TTTCTCGCCGCCGTCAAGCGGAGGCGGATCGAGGACATTCCGGCGACGGACTACGCCGCCGCCGCCATGATCATTGCAAA ATTCAAGAAGGGCTGACCCC
Downstream 100 bases:
>100_bases GGCCGCAGCAATGGCAATCGAGATTTTCGACGTCGAGCAGAATTCGCCCGAGTGGCTCCGCGCCCGCATGGGCATTCCGA CCGCCTCAGAATTTGAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKSVAYKVARSKTILDEIGKEHV AEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEAERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRK LCRRDWQEFHERAEAAASEALSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQER ERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKVHAEIRQFLAAELVAPEVADR LIDAITAGRIPHLSITY
Sequences:
>Translated_337_residues MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKSVAYKVARSKTILDEIGKEHV AEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEAERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRK LCRRDWQEFHERAEAAASEALSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQER ERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKVHAEIRQFLAAELVAPEVADR LIDAITAGRIPHLSITY >Mature_337_residues MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKSVAYKVARSKTILDEIGKEHV AEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEAERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRK LCRRDWQEFHERAEAAASEALSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQER ERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKVHAEIRQFLAAELVAPEVADR LIDAITAGRIPHLSITY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37023; Mature: 37023
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKS CCCEEEHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAYKVARSKTILDEIGKEHVAEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRKLCRRDWQEFHERAEAAASEA HHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAEIRQFLAAELVAPEVADRLIDAITAGRIPHLSITY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure MNAIVTLDSILEPPAGTPALTAADLFGTGNVAQIVDAIEAQVRAEAFDVATEAGRKHIKS CCCEEEHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAYKVARSKTILDEIGKEHVAEIKKQSAAIDAERKTVRDRLDALKGEIIRPVDDWESAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERISGHENALVAIVEAGRGEGRGVYRTPADISAAIEHVRKLCRRDWQEFHERAEAAASEA HHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKLEAALAAAEQAEAERAELEALRREKAERDAADAAERQRVAQEQAEAERKAHAEQQER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERAAQLAAWKAEQEAKAKQQAEEAAARAVDQERARVAAETAEREAAERKRADNKRRRDKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAEIRQFLAAELVAPEVADRLIDAITAGRIPHLSITY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA