Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291408

Identifier: 192291408

GI number: 192291408

Start: 3291088

End: 3291714

Strand: Reverse

Name: 192291408

Synonym: Rpal_3032

Alternate gene names: NA

Gene position: 3291714-3291088 (Counterclockwise)

Preceding gene: 192291409

Following gene: 192291407

Centisome position: 57.31

GC content: 61.08

Gene sequence:

>627_bases
ATGGCAATCGAGATTTTCGACGTCGAGCAGAATTCGCCCGAGTGGCTCCGCGCCCGCATGGGCATTCCGACCGCCTCAGA
ATTTGAGGCGATCATCACGCCCGGGAAGACGAAGGCCGAGCAGAAAACCCGCCGCACCTACATGCTGAAACTCGCCGGCG
AGCTTCTGACTAACGAGCCGATGGGATCGGCGAACACAAAGGACATGCAGCGCGGCCACGCGCTGGAAGACGAGGCGCGC
GACCTGTACCAATTCCTAACCGGCGCAGAGACGCGCCGCGTCGGCTTCATCCGCAACGGCCGCGCCGGCTGTTCGCCGGA
CAGCCTGATCGGCGAGGACGGCGGCCTTGAGATCAAGACCAAGGCGCCGCACCTGTTACTTGACGTCATCATGAAAGATG
AATTTCCGGAGGAACACAAAGCCCAGGTTCAGGGCGCACTTTGGCTAACGAACCGCGAATGGTGGGACATCGCCGTTTAC
TGGCGCAATCTTCCGCTTTTCATCAAGCGGGCCTATCGGGACGAGCCCTATATCCAACGCCTCGCGACTGAGGTTGATCG
GTTCAACGCCGAGCTTGATGCGATCGTCGCCGAGATCCGGCTCCGTGGTGAGGCGCTGGCAGCATGA

Upstream 100 bases:

>100_bases
GCCGCGGAACTGGTCGCGCCGGAAGTGGCCGACCGCCTGATTGACGCCATCACCGCCGGCCGCATCCCCCACCTGTCTAT
CACCTACTGAGGCCGCAGCA

Downstream 100 bases:

>100_bases
CACGCATCAAACGAAGCGGGCCGCCAAGCACCCGCAACCTCGAAGCTGCTGACCTGATCAGCAGGGCAACTGCGGTCTGC
GAGAAATGCAGAACCGATTG

Product: exonuclease, phage-type

Products: NA

Alternate protein names: Phage-Related Exonuclease; Phage-Type Endonuclease; Bacteriophage Exonuclease; Phage Related Protein; Exonuclease Phage-Type; Phage Related Exonuclease; Exonuclease Phage Origin; Phage-Like Protein; Exodeoxyribonuclease

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEPMGSANTKDMQRGHALEDEAR
DLYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKTKAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVY
WRNLPLFIKRAYRDEPYIQRLATEVDRFNAELDAIVAEIRLRGEALAA

Sequences:

>Translated_208_residues
MAIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEPMGSANTKDMQRGHALEDEAR
DLYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKTKAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVY
WRNLPLFIKRAYRDEPYIQRLATEVDRFNAELDAIVAEIRLRGEALAA
>Mature_207_residues
AIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEPMGSANTKDMQRGHALEDEARD
LYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKTKAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVYW
RNLPLFIKRAYRDEPYIQRLATEVDRFNAELDAIVAEIRLRGEALAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23718; Mature: 23587

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEP
CEEEEEECCCCCHHHHHHHCCCCCHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
MGSANTKDMQRGHALEDEARDLYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKT
CCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEE
KAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVYWRNLPLFIKRAYRDEPYIQR
CCCHHHHHHHHHCCCCHHHHHHHCEEEEECCCCEEEEEEEECCCHHHHHHHHCCCHHHHH
LATEVDRFNAELDAIVAEIRLRGEALAA
HHHHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
AIEIFDVEQNSPEWLRARMGIPTASEFEAIITPGKTKAEQKTRRTYMLKLAGELLTNEP
EEEEEECCCCCHHHHHHHCCCCCHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
MGSANTKDMQRGHALEDEARDLYQFLTGAETRRVGFIRNGRAGCSPDSLIGEDGGLEIKT
CCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCCCCCEEEEE
KAPHLLLDVIMKDEFPEEHKAQVQGALWLTNREWWDIAVYWRNLPLFIKRAYRDEPYIQR
CCCHHHHHHHHHCCCCHHHHHHHCEEEEECCCCEEEEEEEECCCHHHHHHHHCCCHHHHH
LATEVDRFNAELDAIVAEIRLRGEALAA
HHHHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA