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The map label for this gene is yclN [H]

Identifier: 192291007

GI number: 192291007

Start: 2843309

End: 2844286

Strand: Reverse

Name: yclN [H]

Synonym: Rpal_2626

Alternate gene names: 192291007

Gene position: 2844286-2843309 (Counterclockwise)

Preceding gene: 192291008

Following gene: 192291006

Centisome position: 49.52

GC content: 67.18

Gene sequence:

>978_bases
ATGATCGCAGTCGAGCGAACGGCGTCGCGCTCCGCCGGGGCGACCGCGCTGCTGGCGCTTGTCGCCCTGTTCGTCGTCAG
CATCTTCGTCGGCGTTGGCGAGGTCGCACCGCGCGATGTCTTCACCAGTCCCGATGCGCTGTATCTCGTCGTCGCGAGCC
GGCTGCCGCGCACGCTGGCCGCGGTTCTGACCGGTGCCGGCCTCGCGATTGCCGGCCTGGTGATGCAGACCCTGGCGCGT
AACCGGTTCGTTGAGCCGACCACGGCGGGCACCGGCCAGAGCGCTGCGCTCGGCATCCTGTTGGTCGCGCTGTTGCTCCC
CTCGGCCTCAATCGCCACCAAGACACTGGTCGCGAGCCTGACCGCCCTCGCCGGCACATCGCTGTTCCTGGCGATCGCCC
ATCGGCTGCCGCCGACGCAGCCGTTTCTGGTGCCGTTGTTCGGGCTGGTCTATGGCGGCGTGGTCGGCGCCGCCGTCACC
TTCGTCGCCTGGCACACCGATCTGCTGCAGTTCATCGAGATCTGGACCAACGGCGAGTTCTCCGGCGTCCTGCGTGGCCG
CTACGAACTCCTCTGGGCCTCGGCCGCGGTCCTTGCCATGACCTGGGTGTTCGCCGACCGCCTCACTTTGATGTCGCTTG
GACGTGACGTCAGTGTCGGACTGGGGCTGGACTATGCCCGCATGATGCAAATCGGGCTGCTGATCATCTCGATCGTCACC
GCGCTGACCGTGGTCATCGTCGGGATGATCCCGTTCGTCGGGCTCGTCGTCCCCAACATGGTCTCGCGGCTGATCGGCGA
CAACATGCGGTCGCTGATCCCCTGGGTAGCGGGGAGCGGCGCCGCGCTGGTGCTCGCATGCGACATCATCGGCCGGCTGC
TGCATTTCCCGTACGAGATCCCCGTCGGCACCGTGCTCGGAGTCGTCGGCGCGGCATCTTTCCTGTGGCTTCTATTGCGC
CGTCCTTCCCATGCGTGA

Upstream 100 bases:

>100_bases
TGATCTATCTGCCGTCGGTCGATCTGTACATCGCCGGGGGCGGCATCCAGGCGATGACCCGAGTTCTGGCGGCCCTCACC
CGCGGCTTCTCGGAGCGGCG

Downstream 100 bases:

>100_bases
CAGATCGACGATCGTGCTCGCAACGCTCGGCGCGTTCGCGCTCGCTTGCATCGCGGCCTACATGACGGTCGGTCTACGTG
GAAACCTCTGGTTCGCGCTC

Product: transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIAVERTASRSAGATALLALVALFVVSIFVGVGEVAPRDVFTSPDALYLVVASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVALLLPSASIATKTLVASLTALAGTSLFLAIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHTDLLQFIEIWTNGEFSGVLRGRYELLWASAAVLAMTWVFADRLTLMSLGRDVSVGLGLDYARMMQIGLLIISIVT
ALTVVIVGMIPFVGLVVPNMVSRLIGDNMRSLIPWVAGSGAALVLACDIIGRLLHFPYEIPVGTVLGVVGAASFLWLLLR
RPSHA

Sequences:

>Translated_325_residues
MIAVERTASRSAGATALLALVALFVVSIFVGVGEVAPRDVFTSPDALYLVVASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVALLLPSASIATKTLVASLTALAGTSLFLAIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHTDLLQFIEIWTNGEFSGVLRGRYELLWASAAVLAMTWVFADRLTLMSLGRDVSVGLGLDYARMMQIGLLIISIVT
ALTVVIVGMIPFVGLVVPNMVSRLIGDNMRSLIPWVAGSGAALVLACDIIGRLLHFPYEIPVGTVLGVVGAASFLWLLLR
RPSHA
>Mature_325_residues
MIAVERTASRSAGATALLALVALFVVSIFVGVGEVAPRDVFTSPDALYLVVASRLPRTLAAVLTGAGLAIAGLVMQTLAR
NRFVEPTTAGTGQSAALGILLVALLLPSASIATKTLVASLTALAGTSLFLAIAHRLPPTQPFLVPLFGLVYGGVVGAAVT
FVAWHTDLLQFIEIWTNGEFSGVLRGRYELLWASAAVLAMTWVFADRLTLMSLGRDVSVGLGLDYARMMQIGLLIISIVT
ALTVVIVGMIPFVGLVVPNMVSRLIGDNMRSLIPWVAGSGAALVLACDIIGRLLHFPYEIPVGTVLGVVGAASFLWLLLR
RPSHA

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=29.9684542586751, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=33.8926174496644, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790741, Length=294, Percent_Identity=29.5918367346939, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786805, Length=279, Percent_Identity=32.258064516129, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786347, Length=266, Percent_Identity=30.8270676691729, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34080; Mature: 34080

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVERTASRSAGATALLALVALFVVSIFVGVGEVAPRDVFTSPDALYLVVASRLPRTLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AVLTGAGLAIAGLVMQTLARNRFVEPTTAGTGQSAALGILLVALLLPSASIATKTLVASL
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
TALAGTSLFLAIAHRLPPTQPFLVPLFGLVYGGVVGAAVTFVAWHTDLLQFIEIWTNGEF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SGVLRGRYELLWASAAVLAMTWVFADRLTLMSLGRDVSVGLGLDYARMMQIGLLIISIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
ALTVVIVGMIPFVGLVVPNMVSRLIGDNMRSLIPWVAGSGAALVLACDIIGRLLHFPYEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
PVGTVLGVVGAASFLWLLLRRPSHA
CHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIAVERTASRSAGATALLALVALFVVSIFVGVGEVAPRDVFTSPDALYLVVASRLPRTLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
AVLTGAGLAIAGLVMQTLARNRFVEPTTAGTGQSAALGILLVALLLPSASIATKTLVASL
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
TALAGTSLFLAIAHRLPPTQPFLVPLFGLVYGGVVGAAVTFVAWHTDLLQFIEIWTNGEF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
SGVLRGRYELLWASAAVLAMTWVFADRLTLMSLGRDVSVGLGLDYARMMQIGLLIISIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
ALTVVIVGMIPFVGLVVPNMVSRLIGDNMRSLIPWVAGSGAALVLACDIIGRLLHFPYEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
PVGTVLGVVGAASFLWLLLRRPSHA
CHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]