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The map label for this gene is yclQ [H]

Identifier: 192291008

GI number: 192291008

Start: 2844283

End: 2845188

Strand: Reverse

Name: yclQ [H]

Synonym: Rpal_2627

Alternate gene names: 192291008

Gene position: 2845188-2844283 (Counterclockwise)

Preceding gene: 192291009

Following gene: 192291007

Centisome position: 49.53

GC content: 65.01

Gene sequence:

>906_bases
ATGTATGTGATCCGCATAATCGCCGTGCTGGCAGCCCTCGCTCTGCCTGCGTCGGCCGTCGCTGAAACGATCGATATCCA
GACCGCACAGGGGATGGTCAGAGTGCCGGCAAACCCGTCTCGCGTCGCCGTATTCGACATGGCGGCGCTCGATACGCTCG
ACCTGCTCGGCGTCAAGGCCGCCGGCGTACCGGATCGGGTTTTCCTGCCCGAGCTGAAGGCGGCAACTGCTGGAGGCGAG
GTTGTCGGCACGCTGTTCGAACCCAATCTCGAAGCGCTCAGCGCGCTCGCGCCGGATCTGATCATTCTCGGCGGCCGATC
GTCTCCAAAAGCAAAGTTCACCGCGCGTATCGCCCCCACGATCGACATGACAATCGACGGACAGGAACTGGTCCGGGATG
CCGAAGCCCGGCTTCAGGCCTACGGCCGGCTGTTCGGCCGCGAGCAGGCCGCAGAGGACGCCGGACAGAAGTTCAAATCG
GCGATCGCCGCGGCGCGCGATGCGGCAAAGGGAAAGGGTCGCGCGCTGATCGTGATGACCAACGGGCCGAAAATCTCCGC
CTTCGGGATCGGATCACGCTTCGGCTGGATTCACACCACGCTCGAGATCGAGCCCGCGGTGAACACCATGGCCCCTTCGA
TCCACGGCGAGGCGGTCTCTTTCGAGTTTGTCCGCAAGGCCGATCCGGACTGGCTGATCGTGGTCGACCGCGCGATGGCG
ATCGGCGCCGGCGACAGCCAGGCACAGGCCACGCTCGACAACGAGCTGGTGCATGACACCAAGGCCTGGAAGAGCCGCCA
CGTGATCTATCTGCCGTCGGTCGATCTGTACATCGCCGGGGGCGGCATCCAGGCGATGACCCGAGTTCTGGCGGCCCTCA
CCCGCGGCTTCTCGGAGCGGCGATGA

Upstream 100 bases:

>100_bases
CCGCGATCGGCTGGCCATTCTCTCACACTTCACTTCGGCAAGGGGCGGCGCCGGATCCGCACGCGATCGCCGGCCACGTC
GCCTCAGCTAAAGGACAATC

Downstream 100 bases:

>100_bases
TCGCAGTCGAGCGAACGGCGTCGCGCTCCGCCGGGGCGACCGCGCTGCTGGCGCTTGTCGCCCTGTTCGTCGTCAGCATC
TTCGTCGGCGTTGGCGAGGT

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MYVIRIIAVLAALALPASAVAETIDIQTAQGMVRVPANPSRVAVFDMAALDTLDLLGVKAAGVPDRVFLPELKAATAGGE
VVGTLFEPNLEALSALAPDLIILGGRSSPKAKFTARIAPTIDMTIDGQELVRDAEARLQAYGRLFGREQAAEDAGQKFKS
AIAAARDAAKGKGRALIVMTNGPKISAFGIGSRFGWIHTTLEIEPAVNTMAPSIHGEAVSFEFVRKADPDWLIVVDRAMA
IGAGDSQAQATLDNELVHDTKAWKSRHVIYLPSVDLYIAGGGIQAMTRVLAALTRGFSERR

Sequences:

>Translated_301_residues
MYVIRIIAVLAALALPASAVAETIDIQTAQGMVRVPANPSRVAVFDMAALDTLDLLGVKAAGVPDRVFLPELKAATAGGE
VVGTLFEPNLEALSALAPDLIILGGRSSPKAKFTARIAPTIDMTIDGQELVRDAEARLQAYGRLFGREQAAEDAGQKFKS
AIAAARDAAKGKGRALIVMTNGPKISAFGIGSRFGWIHTTLEIEPAVNTMAPSIHGEAVSFEFVRKADPDWLIVVDRAMA
IGAGDSQAQATLDNELVHDTKAWKSRHVIYLPSVDLYIAGGGIQAMTRVLAALTRGFSERR
>Mature_301_residues
MYVIRIIAVLAALALPASAVAETIDIQTAQGMVRVPANPSRVAVFDMAALDTLDLLGVKAAGVPDRVFLPELKAATAGGE
VVGTLFEPNLEALSALAPDLIILGGRSSPKAKFTARIAPTIDMTIDGQELVRDAEARLQAYGRLFGREQAAEDAGQKFKS
AIAAARDAAKGKGRALIVMTNGPKISAFGIGSRFGWIHTTLEIEPAVNTMAPSIHGEAVSFEFVRKADPDWLIVVDRAMA
IGAGDSQAQATLDNELVHDTKAWKSRHVIYLPSVDLYIAGGGIQAMTRVLAALTRGFSERR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4607

COG function: function code P; ABC-type enterochelin transport system, periplasmic component

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 31913; Mature: 31913

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVIRIIAVLAALALPASAVAETIDIQTAQGMVRVPANPSRVAVFDMAALDTLDLLGVKA
CHHHHHHHHHHHHHCCHHHHHHHHEEEECCCEEECCCCCCEEEEEEHHHHHHHHHHCCCC
AGVPDRVFLPELKAATAGGEVVGTLFEPNLEALSALAPDLIILGGRSSPKAKFTARIAPT
CCCCCCEECCCHHHCCCCCCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCEEEEEECCE
IDMTIDGQELVRDAEARLQAYGRLFGREQAAEDAGQKFKSAIAAARDAAKGKGRALIVMT
EEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NGPKISAFGIGSRFGWIHTTLEIEPAVNTMAPSIHGEAVSFEFVRKADPDWLIVVDRAMA
CCCEEEEEECCCCCCEEEEEEEECCCHHHHCCCCCCCEEEEEEHHCCCCCEEEEEECEEE
IGAGDSQAQATLDNELVHDTKAWKSRHVIYLPSVDLYIAGGGIQAMTRVLAALTRGFSER
ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MYVIRIIAVLAALALPASAVAETIDIQTAQGMVRVPANPSRVAVFDMAALDTLDLLGVKA
CHHHHHHHHHHHHHCCHHHHHHHHEEEECCCEEECCCCCCEEEEEEHHHHHHHHHHCCCC
AGVPDRVFLPELKAATAGGEVVGTLFEPNLEALSALAPDLIILGGRSSPKAKFTARIAPT
CCCCCCEECCCHHHCCCCCCEEEEECCCCHHHHHHCCCCEEEECCCCCCCCEEEEEECCE
IDMTIDGQELVRDAEARLQAYGRLFGREQAAEDAGQKFKSAIAAARDAAKGKGRALIVMT
EEEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NGPKISAFGIGSRFGWIHTTLEIEPAVNTMAPSIHGEAVSFEFVRKADPDWLIVVDRAMA
CCCEEEEEECCCCCCEEEEEEEECCCHHHHCCCCCCCEEEEEEHHCCCCCEEEEEECEEE
IGAGDSQAQATLDNELVHDTKAWKSRHVIYLPSVDLYIAGGGIQAMTRVLAALTRGFSER
ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 10658653 [H]