Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290939

Identifier: 192290939

GI number: 192290939

Start: 2762818

End: 2763318

Strand: Reverse

Name: 192290939

Synonym: Rpal_2556

Alternate gene names: NA

Gene position: 2763318-2762818 (Counterclockwise)

Preceding gene: 192290942

Following gene: 192290938

Centisome position: 48.11

GC content: 68.66

Gene sequence:

>501_bases
ATGCTGACCATCGAGGGCGAGGAAGATCTCATCGACATCCACTTCGATATGGTCGCCGCGTATCACGGCCAGAGCGCGCT
TGCGATGCTCGCAGTGACGTTTCAGGCGCTGCGCCTGATGCTGCCGGCGCTGTCGCCGCAGCGTCCCCTGCGACGCTCGG
AGCTCACCGTGATCAGCGGACACCCCGGCCCGGGTGTGCGTGACGCTTTCGAGTTCGTCACCCGCGCGGTGACGCGCGGC
GTCTACACCGTCGACCGCTCGTTGCCGCACGCGCGGCTGTGTCCGGGCGCCGACATGTCCTACAGCTGGCGGGTTTCAGC
GGGCGAGCAGACCGTCGGCGTCGCGCTGCGTCCGGGCGTGGTGCCGGAGCGGTTCTTCGAGTTGATCGGCCGCGGTGCTG
CGCGGAGCGATGAAGAGAATGCGGAGCTCTCCGCGCTGAAGCGCAGCGTCGCCGATGATGTGCTGGCCGCGTCGCCCGAC
GCGCTGTTCGACCGGCTGTGA

Upstream 100 bases:

>100_bases
TGCCGCCCCTCCAGCGTTGTTGATACGCGAAGCGATATCTCGCGTGACTTACGCCGGAGAAGACAGCCTCATCATGACGA
CACCTCCCGAGATCCGCCCG

Downstream 100 bases:

>100_bases
CCTGGAGCACGTGATGAAAACCATCATCCGGTTCTCCTGCGGCCACAACACCTCGTCGGCAAGCTGGGCCGAACGGCTCG
GCGGCCTGCCCTGCACCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLTIEGEEDLIDIHFDMVAAYHGQSALAMLAVTFQALRLMLPALSPQRPLRRSELTVISGHPGPGVRDAFEFVTRAVTRG
VYTVDRSLPHARLCPGADMSYSWRVSAGEQTVGVALRPGVVPERFFELIGRGAARSDEENAELSALKRSVADDVLAASPD
ALFDRL

Sequences:

>Translated_166_residues
MLTIEGEEDLIDIHFDMVAAYHGQSALAMLAVTFQALRLMLPALSPQRPLRRSELTVISGHPGPGVRDAFEFVTRAVTRG
VYTVDRSLPHARLCPGADMSYSWRVSAGEQTVGVALRPGVVPERFFELIGRGAARSDEENAELSALKRSVADDVLAASPD
ALFDRL
>Mature_166_residues
MLTIEGEEDLIDIHFDMVAAYHGQSALAMLAVTFQALRLMLPALSPQRPLRRSELTVISGHPGPGVRDAFEFVTRAVTRG
VYTVDRSLPHARLCPGADMSYSWRVSAGEQTVGVALRPGVVPERFFELIGRGAARSDEENAELSALKRSVADDVLAASPD
ALFDRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18076; Mature: 18076

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIEGEEDLIDIHFDMVAAYHGQSALAMLAVTFQALRLMLPALSPQRPLRRSELTVISG
CEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
HPGPGVRDAFEFVTRAVTRGVYTVDRSLPHARLCPGADMSYSWRVSAGEQTVGVALRPGV
CCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC
VPERFFELIGRGAARSDEENAELSALKRSVADDVLAASPDALFDRL
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MLTIEGEEDLIDIHFDMVAAYHGQSALAMLAVTFQALRLMLPALSPQRPLRRSELTVISG
CEEECCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
HPGPGVRDAFEFVTRAVTRGVYTVDRSLPHARLCPGADMSYSWRVSAGEQTVGVALRPGV
CCCCCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCC
VPERFFELIGRGAARSDEENAELSALKRSVADDVLAASPDALFDRL
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA