Click here to switch to the map view.

The map label for this gene is oruR [H]

Identifier: 192290927

GI number: 192290927

Start: 2748994

End: 2749986

Strand: Reverse

Name: oruR [H]

Synonym: Rpal_2544

Alternate gene names: 192290927

Gene position: 2749986-2748994 (Counterclockwise)

Preceding gene: 192290933

Following gene: 192290919

Centisome position: 47.88

GC content: 70.9

Gene sequence:

>993_bases
ATGGAGCGGCGGACGATCGCGCCCCTGTTCGTGGAAGAGGTCGCCGACTGCCTGCGCCGCGCCGGCGTTGCGCCCGGTCC
GGTGTTCGCGGCCGCCGGCCTGCCCGAGGTGGTGCGCGAGCGCGTGTCGGCAGCGCAGTTCGGCGCGCTATGGCTGGCGG
TGGCGGCGGCAATGGACGACGAGTTCTTCGGCCTCGGCGGGCGGCCGATGCGGCCCGGCTCGTTCACGCTGCTGTGCCAC
GCGGTGCTGAACGCCAGTACGCTGCGGCAGGCCCTGAACCGTGCACTGCGATTCCTGAAGGTGGCGCTGGACGATCCTTA
CGGCGAGCTGCGGGTCGAGGGCGGCCTCGCCCGCATCGTGCTCCACGACAAAACTGCGCCGCGCTCGGCCTTCGCCTATC
GCACCTTCTGGATCGTGGTGCACGGCATCGCCTGCTGGCTGGTCGGCCGTCGGCTGCCGCTGCGCCGAGTCGATTTCGCC
TGCGGCCCGCCGGCCGTCGCCGCCGACTATCGCTCGTTCTTCGGCGCGCCGGTGCGGTTCGGTCAGCCGCAAAGCGCACT
GGCGTTCGACGCCAGCTATCTCGATCTGCGCACCACGCGCACCGAGCGAGCGCTGAAGGAGTTTCTACGGCTGGCGCCGG
CCAACATCCTGGTGCGCTATCGCCACGACGCCACCCTCACCGCCGCGATCCGCACCACGCTGCGCGCCAAGCCGCCGACC
GCGTGGCCGAACTTCGAGACGCTGGCGAAGCAGATGAAGATCCCGGCCTCGACGCTGCGCCGCCGGCTGCGCGCCGAGGG
GCAAACCTACCAGACCATCAAGGACGAAATCCGCCGTGCGCTTGCGATCCGCTGGCTCGCCGAGAACGAAAAGCCGGTCG
GCGACATCGCGGCCGATCTCGGCTTCGCCGAACCCAGCGCGTTCCACCGCGCATTCCGCAAATGGATGGCGCGCAGCCCC
GGCGCTTTCCGCCGCGAAACCCGCGCGGGGTGA

Upstream 100 bases:

>100_bases
TCACGGCCGCGGATTAAGCGGCGGAGCCCTGTGGCTTTCTAGGACCAAACTGACCTAGATTTGTGATCGGTTTTGCCACT
TTTCAGGAAGGAGCGGACGA

Downstream 100 bases:

>100_bases
GAGATCGTCCAATTCAGTCTGGTGTGCGCGTCACCGCCGTGCGCGGGCGATGAACTCGACTAGGCCGGAGACGCCGAGCT
TGGCGTAGATGCGCTTGATC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MERRTIAPLFVEEVADCLRRAGVAPGPVFAAAGLPEVVRERVSAAQFGALWLAVAAAMDDEFFGLGGRPMRPGSFTLLCH
AVLNASTLRQALNRALRFLKVALDDPYGELRVEGGLARIVLHDKTAPRSAFAYRTFWIVVHGIACWLVGRRLPLRRVDFA
CGPPAVAADYRSFFGAPVRFGQPQSALAFDASYLDLRTTRTERALKEFLRLAPANILVRYRHDATLTAAIRTTLRAKPPT
AWPNFETLAKQMKIPASTLRRRLRAEGQTYQTIKDEIRRALAIRWLAENEKPVGDIAADLGFAEPSAFHRAFRKWMARSP
GAFRRETRAG

Sequences:

>Translated_330_residues
MERRTIAPLFVEEVADCLRRAGVAPGPVFAAAGLPEVVRERVSAAQFGALWLAVAAAMDDEFFGLGGRPMRPGSFTLLCH
AVLNASTLRQALNRALRFLKVALDDPYGELRVEGGLARIVLHDKTAPRSAFAYRTFWIVVHGIACWLVGRRLPLRRVDFA
CGPPAVAADYRSFFGAPVRFGQPQSALAFDASYLDLRTTRTERALKEFLRLAPANILVRYRHDATLTAAIRTTLRAKPPT
AWPNFETLAKQMKIPASTLRRRLRAEGQTYQTIKDEIRRALAIRWLAENEKPVGDIAADLGFAEPSAFHRAFRKWMARSP
GAFRRETRAG
>Mature_330_residues
MERRTIAPLFVEEVADCLRRAGVAPGPVFAAAGLPEVVRERVSAAQFGALWLAVAAAMDDEFFGLGGRPMRPGSFTLLCH
AVLNASTLRQALNRALRFLKVALDDPYGELRVEGGLARIVLHDKTAPRSAFAYRTFWIVVHGIACWLVGRRLPLRRVDFA
CGPPAVAADYRSFFGAPVRFGQPQSALAFDASYLDLRTTRTERALKEFLRLAPANILVRYRHDATLTAAIRTTLRAKPPT
AWPNFETLAKQMKIPASTLRRRLRAEGQTYQTIKDEIRRALAIRWLAENEKPVGDIAADLGFAEPSAFHRAFRKWMARSP
GAFRRETRAG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36754; Mature: 36754

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRTIAPLFVEEVADCLRRAGVAPGPVFAAAGLPEVVRERVSAAQFGALWLAVAAAMDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EFFGLGGRPMRPGSFTLLCHAVLNASTLRQALNRALRFLKVALDDPYGELRVEGGLARIV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEE
LHDKTAPRSAFAYRTFWIVVHGIACWLVGRRLPLRRVDFACGPPAVAADYRSFFGAPVRF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCC
GQPQSALAFDASYLDLRTTRTERALKEFLRLAPANILVRYRHDATLTAAIRTTLRAKPPT
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCCCCC
AWPNFETLAKQMKIPASTLRRRLRAEGQTYQTIKDEIRRALAIRWLAENEKPVGDIAADL
CCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GFAEPSAFHRAFRKWMARSPGAFRRETRAG
CCCCHHHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure
MERRTIAPLFVEEVADCLRRAGVAPGPVFAAAGLPEVVRERVSAAQFGALWLAVAAAMDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EFFGLGGRPMRPGSFTLLCHAVLNASTLRQALNRALRFLKVALDDPYGELRVEGGLARIV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEE
LHDKTAPRSAFAYRTFWIVVHGIACWLVGRRLPLRRVDFACGPPAVAADYRSFFGAPVRF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCC
GQPQSALAFDASYLDLRTTRTERALKEFLRLAPANILVRYRHDATLTAAIRTTLRAKPPT
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCCCCCC
AWPNFETLAKQMKIPASTLRRRLRAEGQTYQTIKDEIRRALAIRWLAENEKPVGDIAADL
CCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GFAEPSAFHRAFRKWMARSPGAFRRETRAG
CCCCHHHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]