Click here to switch to the map view.

The map label for this gene is 192290904

Identifier: 192290904

GI number: 192290904

Start: 2718358

End: 2720970

Strand: Reverse

Name: 192290904

Synonym: Rpal_2521

Alternate gene names: NA

Gene position: 2720970-2718358 (Counterclockwise)

Preceding gene: 192290907

Following gene: 192290896

Centisome position: 47.37

GC content: 67.89

Gene sequence:

>2613_bases
ATGTCACCGCAGAACTGGGCGGCCATGATTCAACGCGTTCTTGGCATCATCGCTGGCGTCGATCGCAAGACCCTTCAGAG
CTGTCCGGCCTCCGACAAATTATGGGCCACGCATCTGGGCGCATCGCTCTGTCTGTCGTTCGTGGTCGTGCTCGGCGTGT
CGTTCCACGCCACCGGCTACATGATCGACAGTATATGGACTCGGCTGCTGGTCTCGACGGTGATCGCGCTGACCGTGCTG
ATGTTCGACCGCGCGCTGTGCCAGTCCGACTGGTTCTATCAGGGCACGCTGTGGAATACCTCTGCGATCCAGTCGCGCGC
CGAGGCCAAGCAGACCGCCTGGCGGTTCGTCCGCGTCGGCATCCGCCTGACGCTGTCGTTCGGGCTGGCCTGGGTGATCG
CGATGTTCCTGGAACTGGCGATCTTCTCCTCGACCATCAACGAGAAGATCGAGGCCGACCGGGTCGTCGCCAACCAGCCG
GTCTACGATAAGATCGCAGCGTTCGAAGCCGGGCTGAATGCCGAAGCCAAGCGCCGGCTCGCCGACATCGAACAGCTCGA
AGCGTTGCACCGCGACGCCCTCACCGAGCAGCCGAAGCCGGAGCCGACCACCCAGGCCCGCACCGAGGACATCGAGCAGC
AGATCCGCGCGCTGGCCACCCGCGAGGCCGGCATCCGCGCCGACATCGCCGAGATCGACAAGACGATCCAGCGCTACATC
GCCGACATGAACGCCGAAGAGTTCGGACTGAAAGCCACACCGAACAATTCCGGCCGCCCCGGCGCAGGCCCCCGCTACGA
ATTCGCCAGGAAGCAGCGCCAGGCATTCCTGGCCCAGCGCGCCGAGCGCGAAGCCGAGATCGCCCAGCTCCACATTCGCC
GTGACGACCTCCGCGCCGCTCAGGCCAAGATCACCACGGACGCGCTCGCCGCCCGCGAGCAGGAGCGCGTTGCGATCAAG
GCGCGCGCCGACGCGTTGCAGCAGCGAATCGATGCAGCCCGCGCCGACCTGAAACAGTTCGAAGTCGACAAGACTGCGAG
CGTCGCCGACTTCCGCAAGAAGGTGATGTCGGACTCCTACTTCCAGGAAAAGAAGGACAAATTCGATCCGCTGACGCGCA
TTGCCGCGTATCAGGAATTGAAGAACGATCCGCGTGACGGCGCCACCATGACGCTGTTCTCGTGGATGACGCGGTGCTTC
ATCATCTTCCTGGAAATCGTTCCGGTCGTTGCGAAAATCTTCTTCTCGCCGCCCAGCGTCTATGCCGCGAAGATTCAGGC
GCAGGTCGAACGCGCGCGGCAGCGGATCGAGAACAACGAGGACCTCGACGACGAAGCCCCCAAGCCCGCCCCCGCCCCGG
CGATGGCTGCCATCACGCTGCCAGCGATGGCCCTCGATCCCGTCACCGTCGCGCAGCCCCAGGCTCAAGCGCCGAAACCG
CAAGCAGCCCCAGCTCCGGAGCCAGCGCGCGCCGCCGAACCGCCGCCTGCGCCGCCGCGCCCGGTCGAGACGGCCCGCGG
CTTCGAGCACGCTCTGCATGACGACGAAGCCGACTACGACGAGATGCGGCGCCGGGACGATCGCCGCGCCTACGAGTGGC
GGCGCTATGGCGGTCGCGACAGCGACGGCGGCTATGACGATTACGATCCGCGCGAGTTCGAACGCCGGGAGTTTGCCCGG
CGCCACGACTACGATCGCTACGACGAGCGGCCGCGCCGTGCCGCAGCCCGCCGCAGTCCGCCCCAATTCGTCGCACGCGA
TTACGCCATCCGCGACTACGGTGGCCGCGACTTCGGCGAACCGGAGTACGAGACCAGCGAGATCGACGTTCGCAACCTGA
TCATGCCGCGGCGCGGCTCAGCGCGGCGCGAGGCCTATGCGGTCGAGCCGACCGCCCGGGTTCGCGTGCCCGCCGACGAC
CGCGGGCCAGCACGAAGCGCCGGGCTGGAGCCTGTCGCCGAACGCAGCCTGCGTTGGCCGGACGGCATTCCGGTCGACGA
CCTCAACACCCGCGAACTGGTCCGCCAAGTGCTGGCCGATGCCGGCACCGCCGCCCGCGCCGAACCGATCCGCAGCGAAC
CGGCGCAGGCCGAGACCACCGCGCGCGTCGAGCCGATCCGCCCGGTCGAGCCCTCCCCCGCCGAACCGGCACCGAGCGAG
CCGGCGGTGATCGAACCCGTGGTTTCAGAAGCTGTCGCGACCGAACCCGCGGCCACGGCCACGGCTTCTGTCGCGGCCTC
GGCGACCTCCACTCCGGAACCGGAACCCGTCCTCACGGTCGCCGAAGCTACGCCCGCGCCGCCGCAGACCCTGGAGCCGG
ATGTGCTGCCGAACGTGCTGACGCGCACGCGCGCGGTGCCGGCAGAGCAGCCGACGCCTTCTCCGCAGGCGACTGCGTCG
GACGAGGCTGCGATCGCAGGCGTGGTTCATCCCGAAGAGATCGGCCCGCTGCCGAAGTTCAGCGCCGACGTCGAGAAGCT
GATGACCGACGCCGTCGAGCTGTCGCGCCCCCGCAAGAAGGCGGCGCATCCACGCCGGGAGCACCACGCCGAAGGCGAAG
CCGAATTGCCGCTGGAGCACAAGGTACGACACGAGACGCCGCCGCAAGCATAG

Upstream 100 bases:

>100_bases
AAATCGGAGCCTGTTGAATCGCCTACTAAACGTCGTCTCGTATTGAATTTGTTTACGCTCTGTTAGACTCGGCCGACCTG
TCACAACCAAACCGCGGCGC

Downstream 100 bases:

>100_bases
CGCCGGCAAGATCAGACCTACCAAAACAGAAAACCGCCGCGCGGCTCAGCCACGCGGCGGTTCTTGTTTTCTGACAACGC
TCATCCGGGTCTGTGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 870; Mature: 869

Protein sequence:

>870_residues
MSPQNWAAMIQRVLGIIAGVDRKTLQSCPASDKLWATHLGASLCLSFVVVLGVSFHATGYMIDSIWTRLLVSTVIALTVL
MFDRALCQSDWFYQGTLWNTSAIQSRAEAKQTAWRFVRVGIRLTLSFGLAWVIAMFLELAIFSSTINEKIEADRVVANQP
VYDKIAAFEAGLNAEAKRRLADIEQLEALHRDALTEQPKPEPTTQARTEDIEQQIRALATREAGIRADIAEIDKTIQRYI
ADMNAEEFGLKATPNNSGRPGAGPRYEFARKQRQAFLAQRAEREAEIAQLHIRRDDLRAAQAKITTDALAAREQERVAIK
ARADALQQRIDAARADLKQFEVDKTASVADFRKKVMSDSYFQEKKDKFDPLTRIAAYQELKNDPRDGATMTLFSWMTRCF
IIFLEIVPVVAKIFFSPPSVYAAKIQAQVERARQRIENNEDLDDEAPKPAPAPAMAAITLPAMALDPVTVAQPQAQAPKP
QAAPAPEPARAAEPPPAPPRPVETARGFEHALHDDEADYDEMRRRDDRRAYEWRRYGGRDSDGGYDDYDPREFERREFAR
RHDYDRYDERPRRAAARRSPPQFVARDYAIRDYGGRDFGEPEYETSEIDVRNLIMPRRGSARREAYAVEPTARVRVPADD
RGPARSAGLEPVAERSLRWPDGIPVDDLNTRELVRQVLADAGTAARAEPIRSEPAQAETTARVEPIRPVEPSPAEPAPSE
PAVIEPVVSEAVATEPAATATASVAASATSTPEPEPVLTVAEATPAPPQTLEPDVLPNVLTRTRAVPAEQPTPSPQATAS
DEAAIAGVVHPEEIGPLPKFSADVEKLMTDAVELSRPRKKAAHPRREHHAEGEAELPLEHKVRHETPPQA

Sequences:

>Translated_870_residues
MSPQNWAAMIQRVLGIIAGVDRKTLQSCPASDKLWATHLGASLCLSFVVVLGVSFHATGYMIDSIWTRLLVSTVIALTVL
MFDRALCQSDWFYQGTLWNTSAIQSRAEAKQTAWRFVRVGIRLTLSFGLAWVIAMFLELAIFSSTINEKIEADRVVANQP
VYDKIAAFEAGLNAEAKRRLADIEQLEALHRDALTEQPKPEPTTQARTEDIEQQIRALATREAGIRADIAEIDKTIQRYI
ADMNAEEFGLKATPNNSGRPGAGPRYEFARKQRQAFLAQRAEREAEIAQLHIRRDDLRAAQAKITTDALAAREQERVAIK
ARADALQQRIDAARADLKQFEVDKTASVADFRKKVMSDSYFQEKKDKFDPLTRIAAYQELKNDPRDGATMTLFSWMTRCF
IIFLEIVPVVAKIFFSPPSVYAAKIQAQVERARQRIENNEDLDDEAPKPAPAPAMAAITLPAMALDPVTVAQPQAQAPKP
QAAPAPEPARAAEPPPAPPRPVETARGFEHALHDDEADYDEMRRRDDRRAYEWRRYGGRDSDGGYDDYDPREFERREFAR
RHDYDRYDERPRRAAARRSPPQFVARDYAIRDYGGRDFGEPEYETSEIDVRNLIMPRRGSARREAYAVEPTARVRVPADD
RGPARSAGLEPVAERSLRWPDGIPVDDLNTRELVRQVLADAGTAARAEPIRSEPAQAETTARVEPIRPVEPSPAEPAPSE
PAVIEPVVSEAVATEPAATATASVAASATSTPEPEPVLTVAEATPAPPQTLEPDVLPNVLTRTRAVPAEQPTPSPQATAS
DEAAIAGVVHPEEIGPLPKFSADVEKLMTDAVELSRPRKKAAHPRREHHAEGEAELPLEHKVRHETPPQA
>Mature_869_residues
SPQNWAAMIQRVLGIIAGVDRKTLQSCPASDKLWATHLGASLCLSFVVVLGVSFHATGYMIDSIWTRLLVSTVIALTVLM
FDRALCQSDWFYQGTLWNTSAIQSRAEAKQTAWRFVRVGIRLTLSFGLAWVIAMFLELAIFSSTINEKIEADRVVANQPV
YDKIAAFEAGLNAEAKRRLADIEQLEALHRDALTEQPKPEPTTQARTEDIEQQIRALATREAGIRADIAEIDKTIQRYIA
DMNAEEFGLKATPNNSGRPGAGPRYEFARKQRQAFLAQRAEREAEIAQLHIRRDDLRAAQAKITTDALAAREQERVAIKA
RADALQQRIDAARADLKQFEVDKTASVADFRKKVMSDSYFQEKKDKFDPLTRIAAYQELKNDPRDGATMTLFSWMTRCFI
IFLEIVPVVAKIFFSPPSVYAAKIQAQVERARQRIENNEDLDDEAPKPAPAPAMAAITLPAMALDPVTVAQPQAQAPKPQ
AAPAPEPARAAEPPPAPPRPVETARGFEHALHDDEADYDEMRRRDDRRAYEWRRYGGRDSDGGYDDYDPREFERREFARR
HDYDRYDERPRRAAARRSPPQFVARDYAIRDYGGRDFGEPEYETSEIDVRNLIMPRRGSARREAYAVEPTARVRVPADDR
GPARSAGLEPVAERSLRWPDGIPVDDLNTRELVRQVLADAGTAARAEPIRSEPAQAETTARVEPIRPVEPSPAEPAPSEP
AVIEPVVSEAVATEPAATATASVAASATSTPEPEPVLTVAEATPAPPQTLEPDVLPNVLTRTRAVPAEQPTPSPQATASD
EAAIAGVVHPEEIGPLPKFSADVEKLMTDAVELSRPRKKAAHPRREHHAEGEAELPLEHKVRHETPPQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96629; Mature: 96497

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQNWAAMIQRVLGIIAGVDRKTLQSCPASDKLWATHLGASLCLSFVVVLGVSFHATGY
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIDSIWTRLLVSTVIALTVLMFDRALCQSDWFYQGTLWNTSAIQSRAEAKQTAWRFVRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
IRLTLSFGLAWVIAMFLELAIFSSTINEKIEADRVVANQPVYDKIAAFEAGLNAEAKRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
ADIEQLEALHRDALTEQPKPEPTTQARTEDIEQQIRALATREAGIRADIAEIDKTIQRYI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADMNAEEFGLKATPNNSGRPGAGPRYEFARKQRQAFLAQRAEREAEIAQLHIRRDDLRAA
HHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKITTDALAAREQERVAIKARADALQQRIDAARADLKQFEVDKTASVADFRKKVMSDSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FQEKKDKFDPLTRIAAYQELKNDPRDGATMTLFSWMTRCFIIFLEIVPVVAKIFFSPPSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAAKIQAQVERARQRIENNEDLDDEAPKPAPAPAMAAITLPAMALDPVTVAQPQAQAPKP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAAPAPEPARAAEPPPAPPRPVETARGFEHALHDDEADYDEMRRRDDRRAYEWRRYGGRD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SDGGYDDYDPREFERREFARRHDYDRYDERPRRAAARRSPPQFVARDYAIRDYGGRDFGE
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PEYETSEIDVRNLIMPRRGSARREAYAVEPTARVRVPADDRGPARSAGLEPVAERSLRWP
CCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCEEECCCCCCCCCHHCCCCHHHHHCCCCC
DGIPVDDLNTRELVRQVLADAGTAARAEPIRSEPAQAETTARVEPIRPVEPSPAEPAPSE
CCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PAVIEPVVSEAVATEPAATATASVAASATSTPEPEPVLTVAEATPAPPQTLEPDVLPNVL
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
TRTRAVPAEQPTPSPQATASDEAAIAGVVHPEEIGPLPKFSADVEKLMTDAVELSRPRKK
HHHHCCCCCCCCCCCCCCCCCCHHEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH
AAHPRREHHAEGEAELPLEHKVRHETPPQA
HCCCCHHHCCCCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SPQNWAAMIQRVLGIIAGVDRKTLQSCPASDKLWATHLGASLCLSFVVVLGVSFHATGY
CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIDSIWTRLLVSTVIALTVLMFDRALCQSDWFYQGTLWNTSAIQSRAEAKQTAWRFVRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
IRLTLSFGLAWVIAMFLELAIFSSTINEKIEADRVVANQPVYDKIAAFEAGLNAEAKRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
ADIEQLEALHRDALTEQPKPEPTTQARTEDIEQQIRALATREAGIRADIAEIDKTIQRYI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADMNAEEFGLKATPNNSGRPGAGPRYEFARKQRQAFLAQRAEREAEIAQLHIRRDDLRAA
HHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAKITTDALAAREQERVAIKARADALQQRIDAARADLKQFEVDKTASVADFRKKVMSDSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FQEKKDKFDPLTRIAAYQELKNDPRDGATMTLFSWMTRCFIIFLEIVPVVAKIFFSPPSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YAAKIQAQVERARQRIENNEDLDDEAPKPAPAPAMAAITLPAMALDPVTVAQPQAQAPKP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAAPAPEPARAAEPPPAPPRPVETARGFEHALHDDEADYDEMRRRDDRRAYEWRRYGGRD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
SDGGYDDYDPREFERREFARRHDYDRYDERPRRAAARRSPPQFVARDYAIRDYGGRDFGE
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PEYETSEIDVRNLIMPRRGSARREAYAVEPTARVRVPADDRGPARSAGLEPVAERSLRWP
CCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCEEECCCCCCCCCHHCCCCHHHHHCCCCC
DGIPVDDLNTRELVRQVLADAGTAARAEPIRSEPAQAETTARVEPIRPVEPSPAEPAPSE
CCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
PAVIEPVVSEAVATEPAATATASVAASATSTPEPEPVLTVAEATPAPPQTLEPDVLPNVL
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
TRTRAVPAEQPTPSPQATASDEAAIAGVVHPEEIGPLPKFSADVEKLMTDAVELSRPRKK
HHHHCCCCCCCCCCCCCCCCCCHHEEECCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH
AAHPRREHHAEGEAELPLEHKVRHETPPQA
HCCCCHHHCCCCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA