| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is pyk1 [H]
Identifier: 192290896
GI number: 192290896
Start: 2711788
End: 2713266
Strand: Reverse
Name: pyk1 [H]
Synonym: Rpal_2513
Alternate gene names: 192290896
Gene position: 2713266-2711788 (Counterclockwise)
Preceding gene: 192290904
Following gene: 192290895
Centisome position: 47.24
GC content: 68.76
Gene sequence:
>1479_bases ATGTCGACCGAAATCCTCCGCCTCAAGCACAAGCTCGACACGCTGATCACCGACATCGACGAGGGCAGCCGCGAGCGGCT GGCCGGCTGGGCGGAGCAGATCCATCGCCCCGGCTTCGGCCCGAGCGCGGCCAACCTCGCCCACTATCTGGCGCTGCGTC ACCACGATCTGCGCCCGCTGCAGCACGCCCTGATGGCGCTGGGACTGTCCTCGCTCGGCCGGCTCGAAAGCCGGGTGATG CCGACGCTGCTCGCGGTGCGCGCCACCCTCGCGGCACTGGCGGGCGAGCCGGAAATGCTGCGGCCGTCGTCGAAGCAGTT CTTCGCCGGCGAGCACGATCTCGCCAGCCGCAGCGCAGAGCTGTTCGGGCCGCTGTCGGGCGCCCGCCATTCCGCCCTGC TGGTCACCTGCCCGAGCGAAGCTGCCGACGATCCGACCTTCATGCTGCGACTCGCCGAGCGCGGCGTCGAAGCGGTGCGG ATCAACTGCGCCCACGACGATGCCGCCGCCTGGCAGCGCATGATCAACCACCTCCACGTCGCGGAGGAAGCCACCGGCCG GCGGATGAAGGTGCTGATGGACATCGCCGGCCCCAAGATCCGCACCGGCGACGCGCGCACGCCCGACGGCCGCGACCGCA TCGTCACCGGCGATCTGGTGGCGATCGTGGCGCAGGGCGAATTCGAGCGGATCGATCTCGATGACGAGCATTTCGCGGTG GAATGCACCCTGCCCGATCCGCTGACCCGCGCCGCCGTCGGCGCCCGGGTGTTCGTCGATGACGGCAAGTTGTGCGTCCG GATCGAGCGCAAGACCGCCTGGGGTCTGCTCGGCCGCGTCACCGCCACCGCCGACACCGGCTTCCGGCTGAAGCCGGAGA AAGGCCTGAACTTCCCGGATACGCAGCTCGATATCCCGGCGCTGACCGCCAAGGACCGCGCAGATCTCGATTTCGTTGCG GCCCATGCCGACGGCGTCGAGTTCTCGTTCGTGCAGTCGGTCGGCGACGTGAAGATGCTGCAGGCTGCGCTCGCCGAACG CCGCCCCGACGACTGGCACAAACTGTCGCTGGTGTTGAAGATCGAGACGCCGGATGCGGTCGCGCACCTGCCGGACATCC TGGTGCAGGCCGCCGGCCGCCAGCCGACCGCGGTGATGATCGCGCGCGGCGATCTCGCGGTGGAGATCGGCTTCGCCCGG CTTGCCGAGATGCAGGAGGAGATCCTGTGGATCGGCGAAGCCGCCCATGTCCCGGTGATCTGGGCCACCCAGGTGCTCGA ACATCTGGTGAAGAAGGGCACCCCGTCGCGCGGCGAAATGACCGACGCCGCGATGGCAGCGCGCGCCGAATGCGTGATGC TGAACAAGGGCCCCTATCTGTTCAAGGCGATCACTGAGCTCGATACCCTGCTCGGCCGAATGGCCGACCATCAGCACAAG AAGACGCCGCAGCTCCGGCGACTGCGCAGCTGGGGCTGA
Upstream 100 bases:
>100_bases TGAGGCCGCGCAGCACCAGATGTCACATCGGCTTCATCCAGCACTCATAGAGCGGGTGGGATGCGGCTCTCCGGCCGCCA GAACCTGCGAGTGCCCTGCG
Downstream 100 bases:
>100_bases GCGCACTCACCTCTGGTATCAACCTAAGGTTGACTCGGCAATATCTTCGTTCACTCTATGTTCCATCAACGGAGCGCAGC CGCTGCAGCGGCCAGAGTGA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK 1 [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSTEILRLKHKLDTLITDIDEGSRERLAGWAEQIHRPGFGPSAANLAHYLALRHHDLRPLQHALMALGLSSLGRLESRVM PTLLAVRATLAALAGEPEMLRPSSKQFFAGEHDLASRSAELFGPLSGARHSALLVTCPSEAADDPTFMLRLAERGVEAVR INCAHDDAAAWQRMINHLHVAEEATGRRMKVLMDIAGPKIRTGDARTPDGRDRIVTGDLVAIVAQGEFERIDLDDEHFAV ECTLPDPLTRAAVGARVFVDDGKLCVRIERKTAWGLLGRVTATADTGFRLKPEKGLNFPDTQLDIPALTAKDRADLDFVA AHADGVEFSFVQSVGDVKMLQAALAERRPDDWHKLSLVLKIETPDAVAHLPDILVQAAGRQPTAVMIARGDLAVEIGFAR LAEMQEEILWIGEAAHVPVIWATQVLEHLVKKGTPSRGEMTDAAMAARAECVMLNKGPYLFKAITELDTLLGRMADHQHK KTPQLRRLRSWG
Sequences:
>Translated_492_residues MSTEILRLKHKLDTLITDIDEGSRERLAGWAEQIHRPGFGPSAANLAHYLALRHHDLRPLQHALMALGLSSLGRLESRVM PTLLAVRATLAALAGEPEMLRPSSKQFFAGEHDLASRSAELFGPLSGARHSALLVTCPSEAADDPTFMLRLAERGVEAVR INCAHDDAAAWQRMINHLHVAEEATGRRMKVLMDIAGPKIRTGDARTPDGRDRIVTGDLVAIVAQGEFERIDLDDEHFAV ECTLPDPLTRAAVGARVFVDDGKLCVRIERKTAWGLLGRVTATADTGFRLKPEKGLNFPDTQLDIPALTAKDRADLDFVA AHADGVEFSFVQSVGDVKMLQAALAERRPDDWHKLSLVLKIETPDAVAHLPDILVQAAGRQPTAVMIARGDLAVEIGFAR LAEMQEEILWIGEAAHVPVIWATQVLEHLVKKGTPSRGEMTDAAMAARAECVMLNKGPYLFKAITELDTLLGRMADHQHK KTPQLRRLRSWG >Mature_491_residues STEILRLKHKLDTLITDIDEGSRERLAGWAEQIHRPGFGPSAANLAHYLALRHHDLRPLQHALMALGLSSLGRLESRVMP TLLAVRATLAALAGEPEMLRPSSKQFFAGEHDLASRSAELFGPLSGARHSALLVTCPSEAADDPTFMLRLAERGVEAVRI NCAHDDAAAWQRMINHLHVAEEATGRRMKVLMDIAGPKIRTGDARTPDGRDRIVTGDLVAIVAQGEFERIDLDDEHFAVE CTLPDPLTRAAVGARVFVDDGKLCVRIERKTAWGLLGRVTATADTGFRLKPEKGLNFPDTQLDIPALTAKDRADLDFVAA HADGVEFSFVQSVGDVKMLQAALAERRPDDWHKLSLVLKIETPDAVAHLPDILVQAAGRQPTAVMIARGDLAVEIGFARL AEMQEEILWIGEAAHVPVIWATQVLEHLVKKGTPSRGEMTDAAMAARAECVMLNKGPYLFKAITELDTLLGRMADHQHKK TPQLRRLRSWG
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI10835121, Length=351, Percent_Identity=27.9202279202279, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI32967597, Length=351, Percent_Identity=27.9202279202279, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI33286418, Length=390, Percent_Identity=28.2051282051282, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI33286422, Length=375, Percent_Identity=28.2666666666667, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI33286420, Length=375, Percent_Identity=28.2666666666667, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI310128732, Length=312, Percent_Identity=26.2820512820513, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI310128730, Length=312, Percent_Identity=26.2820512820513, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI310128736, Length=256, Percent_Identity=25.390625, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI310128734, Length=256, Percent_Identity=25.390625, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI310128738, Length=233, Percent_Identity=26.1802575107296, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1787965, Length=342, Percent_Identity=28.6549707602339, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788160, Length=322, Percent_Identity=26.3975155279503, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17544584, Length=333, Percent_Identity=28.8288288288288, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17506831, Length=335, Percent_Identity=28.6567164179104, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71984413, Length=335, Percent_Identity=28.6567164179104, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17506829, Length=335, Percent_Identity=28.6567164179104, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71984406, Length=335, Percent_Identity=28.6567164179104, Blast_Score=99, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6319279, Length=345, Percent_Identity=28.9855072463768, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324923, Length=324, Percent_Identity=30.2469135802469, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI24648964, Length=356, Percent_Identity=27.8089887640449, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI28571814, Length=356, Percent_Identity=27.8089887640449, Blast_Score=108, Evalue=8e-24, Organism=Drosophila melanogaster, GI24648966, Length=298, Percent_Identity=29.5302013422819, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24581235, Length=355, Percent_Identity=27.0422535211268, Blast_Score=102, Evalue=8e-22,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 53993; Mature: 53862
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEILRLKHKLDTLITDIDEGSRERLAGWAEQIHRPGFGPSAANLAHYLALRHHDLRPL CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH QHALMALGLSSLGRLESRVMPTLLAVRATLAALAGEPEMLRPSSKQFFAGEHDLASRSAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHCCHH LFGPLSGARHSALLVTCPSEAADDPTFMLRLAERGVEAVRINCAHDDAAAWQRMINHLHV HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH AEEATGRRMKVLMDIAGPKIRTGDARTPDGRDRIVTGDLVAIVAQGEFERIDLDDEHFAV HHHHCCCEEEEEEECCCCCEECCCCCCCCCCCEEEECCEEEEEECCCEEEECCCCCCEEE ECTLPDPLTRAAVGARVFVDDGKLCVRIERKTAWGLLGRVTATADTGFRLKPEKGLNFPD EEECCCCHHHHHHCCEEEEECCCEEEEEECCHHHHHHHEEEEECCCCEEECCCCCCCCCC TQLDIPALTAKDRADLDFVAAHADGVEFSFVQSVGDVKMLQAALAERRPDDWHKLSLVLK CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEE IETPDAVAHLPDILVQAAGRQPTAVMIARGDLAVEIGFARLAEMQEEILWIGEAAHVPVI EECCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHEEECCCCCCCCH WATQVLEHLVKKGTPSRGEMTDAAMAARAECVMLNKGPYLFKAITELDTLLGRMADHQHK HHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC KTPQLRRLRSWG CCHHHHHHHCCC >Mature Secondary Structure STEILRLKHKLDTLITDIDEGSRERLAGWAEQIHRPGFGPSAANLAHYLALRHHDLRPL CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH QHALMALGLSSLGRLESRVMPTLLAVRATLAALAGEPEMLRPSSKQFFAGEHDLASRSAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHCCHH LFGPLSGARHSALLVTCPSEAADDPTFMLRLAERGVEAVRINCAHDDAAAWQRMINHLHV HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH AEEATGRRMKVLMDIAGPKIRTGDARTPDGRDRIVTGDLVAIVAQGEFERIDLDDEHFAV HHHHCCCEEEEEEECCCCCEECCCCCCCCCCCEEEECCEEEEEECCCEEEECCCCCCEEE ECTLPDPLTRAAVGARVFVDDGKLCVRIERKTAWGLLGRVTATADTGFRLKPEKGLNFPD EEECCCCHHHHHHCCEEEEECCCEEEEEECCHHHHHHHEEEEECCCCEEECCCCCCCCCC TQLDIPALTAKDRADLDFVAAHADGVEFSFVQSVGDVKMLQAALAERRPDDWHKLSLVLK CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEE IETPDAVAHLPDILVQAAGRQPTAVMIARGDLAVEIGFARLAEMQEEILWIGEAAHVPVI EECCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHEEECCCCCCCCH WATQVLEHLVKKGTPSRGEMTDAAMAARAECVMLNKGPYLFKAITELDTLLGRMADHQHK HHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC KTPQLRRLRSWG CCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]