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The map label for this gene is 192290888

Identifier: 192290888

GI number: 192290888

Start: 2704731

End: 2705159

Strand: Reverse

Name: 192290888

Synonym: Rpal_2505

Alternate gene names: NA

Gene position: 2705159-2704731 (Counterclockwise)

Preceding gene: 192290889

Following gene: 192290887

Centisome position: 47.1

GC content: 60.14

Gene sequence:

>429_bases
ATGCGCTATCTGCTCGACACCAACATCCTCAGCAACATCACCAAGCCAAATCCGTCAGAGACCCTTTTGGCCTGGATGGC
TGATCAGGCGGACACGGATCTCTTCATCTCCTCCCTGACCGTCACCGAAATTCGCCGCGGGATTCTCGATAAGCCGGCAG
GCAAACAACGCGATCAACTGGAAGCCTGGTTTTCAGGGGCTGAAGGACCGCCGGCGCTATTCGCCTGCCGACTACTTCCT
TTCGACGAGCGCGCGGCCCTGGTCTGGGCGCGGCTCATGGCAGACGGCAAAGCTCGAGGCGGGCCTCGGAGTGCGCTTGA
TACCATCATCGCCGCCGTCGCCGAAGCAAACGGATGCCGTGTCGTCACAGACAACGAGAACGACTTCGAGGGTATCGAGC
TCATCAACCCCATCCGGGGAGCGGAATGA

Upstream 100 bases:

>100_bases
AAAAGGGAGGCATCGTTGCCGCGCTCCGGCGCTCGCCCTTGGTCGGCACCACTCTCGATCTGGCGCGTCCGCGCGACGAA
GGGCGCAAGGTCGACCTTTG

Downstream 100 bases:

>100_bases
GCCGAGCGTGAACCGCCGTGGGTTTGCCGGCTACGAGCACATGGCGTTGTCCCGCGCCCGCACCTCCCGATGACTGCCCA
CCACGAGCGTTGAGCCAGCC

Product: PilT protein domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRYLLDTNILSNITKPNPSETLLAWMADQADTDLFISSLTVTEIRRGILDKPAGKQRDQLEAWFSGAEGPPALFACRLLP
FDERAALVWARLMADGKARGGPRSALDTIIAAVAEANGCRVVTDNENDFEGIELINPIRGAE

Sequences:

>Translated_142_residues
MRYLLDTNILSNITKPNPSETLLAWMADQADTDLFISSLTVTEIRRGILDKPAGKQRDQLEAWFSGAEGPPALFACRLLP
FDERAALVWARLMADGKARGGPRSALDTIIAAVAEANGCRVVTDNENDFEGIELINPIRGAE
>Mature_142_residues
MRYLLDTNILSNITKPNPSETLLAWMADQADTDLFISSLTVTEIRRGILDKPAGKQRDQLEAWFSGAEGPPALFACRLLP
FDERAALVWARLMADGKARGGPRSALDTIIAAVAEANGCRVVTDNENDFEGIELINPIRGAE

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15514; Mature: 15514

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLLDTNILSNITKPNPSETLLAWMADQADTDLFISSLTVTEIRRGILDKPAGKQRDQL
CCEEECCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
EAWFSGAEGPPALFACRLLPFDERAALVWARLMADGKARGGPRSALDTIIAAVAEANGCR
HHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
VVTDNENDFEGIELINPIRGAE
EEECCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRYLLDTNILSNITKPNPSETLLAWMADQADTDLFISSLTVTEIRRGILDKPAGKQRDQL
CCEEECCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
EAWFSGAEGPPALFACRLLPFDERAALVWARLMADGKARGGPRSALDTIIAAVAEANGCR
HHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCE
VVTDNENDFEGIELINPIRGAE
EEECCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]