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The map label for this gene is ydcN [C]

Identifier: 192290671

GI number: 192290671

Start: 2472605

End: 2472874

Strand: Reverse

Name: ydcN [C]

Synonym: Rpal_2282

Alternate gene names: 192290671

Gene position: 2472874-2472605 (Counterclockwise)

Preceding gene: 192290673

Following gene: 192290663

Centisome position: 43.05

GC content: 62.59

Gene sequence:

>270_bases
ATGGCCGTCAAGCTACTTGCCACGAACGTTCGCCGTCTTCGGCTGGCCAGAGGCTGGACGCAGGACCAACTCGCAGCGGC
TTTGGAGGTCGAGCAGGGGATCATTTCCCTAATCGAGAACAAACGGTCGAATCCCACCCTCCTCATGCTGGAGGCGATTG
CGGAGGCACTGGGGAGCGATGTAGCCGAGCTGTTCAAGACGGCGACACCGTCGCGATCGCGCGGCCGGACCGGTGGTGGC
GAAAGCGATAGCACCGATCCGCGCAGCTAA

Upstream 100 bases:

>100_bases
AAATATCTGATAAATCACATGGCCAGTTTTGAGGGAAATCTGGACGGTCCGCGTTATGGCGCAGACCGGATTCGGACGTC
GCTTCCCTCAAAGGGAGGGT

Downstream 100 bases:

>100_bases
CCCCCGTCGTCGTTCCGCACGAAGGGCAGCGTAAACCTGAACACCGTGCCGCCATCAGCATTTTCGCCGGCCGATATCCT
CCCGCCGTGACTTTCGATGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAVKLLATNVRRLRLARGWTQDQLAAALEVEQGIISLIENKRSNPTLLMLEAIAEALGSDVAELFKTATPSRSRGRTGGG
ESDSTDPRS

Sequences:

>Translated_89_residues
MAVKLLATNVRRLRLARGWTQDQLAAALEVEQGIISLIENKRSNPTLLMLEAIAEALGSDVAELFKTATPSRSRGRTGGG
ESDSTDPRS
>Mature_88_residues
AVKLLATNVRRLRLARGWTQDQLAAALEVEQGIISLIENKRSNPTLLMLEAIAEALGSDVAELFKTATPSRSRGRTGGGE
SDSTDPRS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9579; Mature: 9448

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKLLATNVRRLRLARGWTQDQLAAALEVEQGIISLIENKRSNPTLLMLEAIAEALGSD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHH
VAELFKTATPSRSRGRTGGGESDSTDPRS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVKLLATNVRRLRLARGWTQDQLAAALEVEQGIISLIENKRSNPTLLMLEAIAEALGSD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHH
VAELFKTATPSRSRGRTGGGESDSTDPRS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA