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The map label for this gene is 192290574

Identifier: 192290574

GI number: 192290574

Start: 2365480

End: 2366016

Strand: Reverse

Name: 192290574

Synonym: Rpal_2183

Alternate gene names: NA

Gene position: 2366016-2365480 (Counterclockwise)

Preceding gene: 192290575

Following gene: 192290573

Centisome position: 41.19

GC content: 67.78

Gene sequence:

>537_bases
ATGAGCCGCGTGTTGCTGGTGCTATTGGTGCTGATTGGCACCGCCGGCGCAGTGGTCGCCTATGGCGATCCGAAAAGGAT
CGCAGAGGCCGGCGACGCGATGTCGACGATGCTGAAGAAGCGCGTCGCCGCTGCCACGGCTGCCGCGGAGGCAGCCAAAG
CCCGCACGGTCGAAATCCCGCGCGGCACCGGCGGGGAGTTCGCGGTGAGCGCCAAGGTCAACGGCGTCGCGGCGCCGATG
GTGATCGACACCGGTGCGACCTCGGTGGTGCTGACTTACGAGACCGCCAAGGCTGCCGGCCTGCCGCTGGAGCTGCTGAA
CTTCAACGTCGAACTGGAAACCGCCGGCGGCCACACCCGCGCGGCGCGGCTGTCGCTCAACACCCTGGCGATCGGCAAAC
TGGTCGAGCGCTCCGTCCCGGCCCTGGTGGTGCCACGCGGCCAGATGAAGACCAACCTTCTCGGCATGAGCTTCCTCGAC
CGCCTCGAAAGCTGGGAAGTCCGCTCCGACCAACTCCGGCTGCGCGGCTATCCCTAG

Upstream 100 bases:

>100_bases
CAGCGCATGGCCGACGCCGGGATGGACGTGCCGAAGCCGCGTCGGCGCCGCCCTGCTGGGACCGACGCACAGGCGTAGCC
CGCTCCGCTTCAGGTGCCCC

Downstream 100 bases:

>100_bases
CCGCCTGTTCTCGCAACTCGCCCAATCAAGCCTCCGCCGCGCGCTTCGCAGCCGACATCCTGTCGGCCCGACCGGCATCA
ATGCGCGGGAAGAGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSRVLLVLLVLIGTAGAVVAYGDPKRIAEAGDAMSTMLKKRVAAATAAAEAAKARTVEIPRGTGGEFAVSAKVNGVAAPM
VIDTGATSVVLTYETAKAAGLPLELLNFNVELETAGGHTRAARLSLNTLAIGKLVERSVPALVVPRGQMKTNLLGMSFLD
RLESWEVRSDQLRLRGYP

Sequences:

>Translated_178_residues
MSRVLLVLLVLIGTAGAVVAYGDPKRIAEAGDAMSTMLKKRVAAATAAAEAAKARTVEIPRGTGGEFAVSAKVNGVAAPM
VIDTGATSVVLTYETAKAAGLPLELLNFNVELETAGGHTRAARLSLNTLAIGKLVERSVPALVVPRGQMKTNLLGMSFLD
RLESWEVRSDQLRLRGYP
>Mature_177_residues
SRVLLVLLVLIGTAGAVVAYGDPKRIAEAGDAMSTMLKKRVAAATAAAEAAKARTVEIPRGTGGEFAVSAKVNGVAAPMV
IDTGATSVVLTYETAKAAGLPLELLNFNVELETAGGHTRAARLSLNTLAIGKLVERSVPALVVPRGQMKTNLLGMSFLDR
LESWEVRSDQLRLRGYP

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18671; Mature: 18540

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVLLVLLVLIGTAGAVVAYGDPKRIAEAGDAMSTMLKKRVAAATAAAEAAKARTVEIP
CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC
RGTGGEFAVSAKVNGVAAPMVIDTGATSVVLTYETAKAAGLPLELLNFNVELETAGGHTR
CCCCCCEEEEEECCCEEECEEEECCCCEEEEEEECCCCCCCCEEHEEEEEEEEECCCCCE
AARLSLNTLAIGKLVERSVPALVVPRGQMKTNLLGMSFLDRLESWEVRSDQLRLRGYP
EEEEEEHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
>Mature Secondary Structure 
SRVLLVLLVLIGTAGAVVAYGDPKRIAEAGDAMSTMLKKRVAAATAAAEAAKARTVEIP
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC
RGTGGEFAVSAKVNGVAAPMVIDTGATSVVLTYETAKAAGLPLELLNFNVELETAGGHTR
CCCCCCEEEEEECCCEEECEEEECCCCEEEEEEECCCCCCCCEEHEEEEEEEEECCCCCE
AARLSLNTLAIGKLVERSVPALVVPRGQMKTNLLGMSFLDRLESWEVRSDQLRLRGYP
EEEEEEHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]