| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290575
Identifier: 192290575
GI number: 192290575
Start: 2366039
End: 2366263
Strand: Reverse
Name: 192290575
Synonym: Rpal_2184
Alternate gene names: NA
Gene position: 2366263-2366039 (Counterclockwise)
Preceding gene: 192290576
Following gene: 192290574
Centisome position: 41.2
GC content: 68.89
Gene sequence:
>225_bases ATGAGCATCGAAACGCCCTGCATCGCAGTCTGCATGATCAATCCGCAGACCAACCTCTGCTACGGCTGCGGCCGCACCAT GCCGGAGATCGCGCGCTGGCCGCGGATGGACAGCGCCGAACGACTCGCCATCATGGCCGGACTGCCGCAGCGCATGGCCG ACGCCGGGATGGACGTGCCGAAGCCGCGTCGGCGCCGCCCTGCTGGGACCGACGCACAGGCGTAG
Upstream 100 bases:
>100_bases CCGAGAACGCCCGCGCGCGGCGGCAGCCGATCATGAACGCCGGCACCGGCTTGTGAGATCGGGACTTGCGGGAGGCGACC AATGTCAGCCACCATCCGAT
Downstream 100 bases:
>100_bases CCCGCTCCGCTTCAGGTGCCCCATGAGCCGCGTGTTGCTGGTGCTATTGGTGCTGATTGGCACCGCCGGCGCAGTGGTCG CCTATGGCGATCCGAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSIETPCIAVCMINPQTNLCYGCGRTMPEIARWPRMDSAERLAIMAGLPQRMADAGMDVPKPRRRRPAGTDAQA
Sequences:
>Translated_74_residues MSIETPCIAVCMINPQTNLCYGCGRTMPEIARWPRMDSAERLAIMAGLPQRMADAGMDVPKPRRRRPAGTDAQA >Mature_73_residues SIETPCIAVCMINPQTNLCYGCGRTMPEIARWPRMDSAERLAIMAGLPQRMADAGMDVPKPRRRRPAGTDAQA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8148; Mature: 8016
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 9.5 %Met (Translated Protein) 14.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 8.2 %Met (Mature Protein) 13.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIETPCIAVCMINPQTNLCYGCGRTMPEIARWPRMDSAERLAIMAGLPQRMADAGMDVP CCCCCCEEEEEEECCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCC KPRRRRPAGTDAQA CCCCCCCCCCCCCC >Mature Secondary Structure SIETPCIAVCMINPQTNLCYGCGRTMPEIARWPRMDSAERLAIMAGLPQRMADAGMDVP CCCCCEEEEEEECCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHCCCHHHHHCCCCCC KPRRRRPAGTDAQA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA