| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cyaB [H]
Identifier: 192290567
GI number: 192290567
Start: 2356144
End: 2358132
Strand: Reverse
Name: cyaB [H]
Synonym: Rpal_2176
Alternate gene names: 192290567
Gene position: 2358132-2356144 (Counterclockwise)
Preceding gene: 192290568
Following gene: 192290560
Centisome position: 41.05
GC content: 63.9
Gene sequence:
>1989_bases ATGAAATTCACCACACGATTGGTCCTGCTGGTCACGGTGCTGACGGTCGGCGCCACGCTCGTGACCGCGGCGCTGCTGAC CTGGACCACACGGCGAGCGATCATCACCGAAGCCGAAGCATCGGGTGAGAAAGTCGCGCGGCTGCTGGCGCGCAGTGCCA GCCTCGCCGCGTCGATCCCGACCGAGGTCGAGGGGATCATTGCCGAAGAGATGATCGCCGAAGGCACCCTGCTCGGTCAT TTCGTCGAAGCCGCCGAACGCGCCGGGATGACGCCGACCGAGATCAATCGCCGGCTGAAGTCGATCACCGACGATACCGT GCTGGACGAGATCTGGATCACCGACGAGAAAGGTCACGCCTATCTGCACAGTCTGCCGGACGTGAACTTCACGTTCAGCA ATTCGCCACAGCTGCAGCCTCAGGCCTACGCCTTCTACGATCTGCTCAACGGCCAGAAGAAGGTGGTCAATCAGGACGCC CGCAAACGCGACATCGACAATCAGCATTTCAAATATGTCGGCGTCGGCGGCATCGACAAACCGCGGATCATCCAGGTCGG ACGCAGCGCCAAATTCCTGCAGCAGCTGACGATGAAGATCGGCCTGCCGCGCACGGTCGAGAATCTGCTCGCGGACGGCG ACATCGACGCGGTGTGGGTGTTCGACCGCAAGCTCGACGCGCTGGTCGGCCCCGGCGTGTATGGCGCCGATCGTCGCGAC GGTCCCAACGAGAAAGAACTCGGCCCGGTGCGTCTGGTGATCGCTGACGGCCAAACACGGCACGTCGAGAGTCGCCAGAA CCTCAGCGTGATCGCGCCGGTGCGCAACGACCAGAAGGAGATCGTCGGTGCCGCGCTGGTTCGCCTGCCGATGAACCGCG TCTGGGCCACGGTGCAGAGCCAGGCCGAGATCGCGGCGGCGACCGCGTCGGCGATCGCCGCGCTCGGCATCCTGCTGTCG ATCGGGGTCGCCCGCTATCAGGCAGCACCGCTGCGCCAAATCACCCGCGCGGCCGTCGCGCTGGAATCGCAGAAGTTCGA CCCTGCCTTGCTCAAGCCGGTCTCCGCACGCCGCGACGAGCTCGGCCAACTCGCCCGAGTGTTCACCGGCATGGCCGGAC AAGTCGCCGCGCGCGAGGAATATCTCGACTCGATGGTGAAGCAGCGCACCGAGGAATTGGAGACCCGCAACCGCAGCCTC GAAGGCCTGTCGGCGGCGCTGTCGAAATATCTGTCGCCGCAAGTGTACTCGTCGATTTTCAGCGGTCATCAGGACGCCGA GATCGCCTCCAAACGCAAGAAGCTGACGATCTTCCTGTCCGACATCGCCAACTTCACGGCCACCACCGACAAGCTGGAGT CGGAAGACCTCACCGCGATGCTCAACCGCTATCTCGCCGAGATGGCGCAGATCGCGCTCAAGCACGGCGCCACCATCGAC AAATATGTCGGTGACGCCGTGCTCGCCTTCTTCGGCGATCCGGACAGCCGCGGCGTCAAGGAGGACGCGGTCGCCTGCGT GATGATGGCGATCGAGATGCAGGAGAAGCTGAAGCAACTCGAGATGGAGTGGATCGACGCCGGCGCCGAGCGCCCGTTCC GGGTCCGCATCGGCATCAACACCGGCTTCTGCACCGTCGGCAATTTCGGCAGCCCGGACCGGATGGACTACACTATCGTC GGCGGGGCCGTGAACCTCACCTCGCGCCTGGAGCAGAACTGCGAGCCCGGCTCGATCCTGATTTCGCACGTCACCTGGTC GCTGGTGAACGACGTGATCGACGCCGAAGAGCGTCCGGCGCTCACGGTGAAAGGCTTCAGCGAGCCGGTGCGCGCCTATG AGGTGCGCGGATTGAAGACGTCAGTATCGACCGACGTGATCCGCAAGGAGCTGCCCGGAATGCGGCTGTTCATCGACACC GGCACGGCGGATCGGACCGAAGTAAAACAGACGCTGGTGCAGGTGGTCGAAGACCTGGACAAAAGCTGA
Upstream 100 bases:
>100_bases CCGGTCGCAGCGCGGGGCTCGGCTGCGCGGTGTTCGCACCGCCTCGCGCGGCTCTCTGCCGGCGGCGCCCAAACGGGTGG CGGCAAGTACAGGTTCTTCC
Downstream 100 bases:
>100_bases GGCAACCAAGCGCTGCGGGCCAGCGCTACTTGTCCGGCTCGACGGTGATCTCTTTGAGCGCGCCGTTCGACACCACCACG ACCACGAACACCAGCTTGTC
Product: adenylate/guanylate cyclase with integral membrane sensor
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MKFTTRLVLLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEKVARLLARSASLAASIPTEVEGIIAEEMIAEGTLLGH FVEAAERAGMTPTEINRRLKSITDDTVLDEIWITDEKGHAYLHSLPDVNFTFSNSPQLQPQAYAFYDLLNGQKKVVNQDA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKFLQQLTMKIGLPRTVENLLADGDIDAVWVFDRKLDALVGPGVYGADRRD GPNEKELGPVRLVIADGQTRHVESRQNLSVIAPVRNDQKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIAALGILLS IGVARYQAAPLRQITRAAVALESQKFDPALLKPVSARRDELGQLARVFTGMAGQVAAREEYLDSMVKQRTEELETRNRSL EGLSAALSKYLSPQVYSSIFSGHQDAEIASKRKKLTIFLSDIANFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPDSRGVKEDAVACVMMAIEMQEKLKQLEMEWIDAGAERPFRVRIGINTGFCTVGNFGSPDRMDYTIV GGAVNLTSRLEQNCEPGSILISHVTWSLVNDVIDAEERPALTVKGFSEPVRAYEVRGLKTSVSTDVIRKELPGMRLFIDT GTADRTEVKQTLVQVVEDLDKS
Sequences:
>Translated_662_residues MKFTTRLVLLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEKVARLLARSASLAASIPTEVEGIIAEEMIAEGTLLGH FVEAAERAGMTPTEINRRLKSITDDTVLDEIWITDEKGHAYLHSLPDVNFTFSNSPQLQPQAYAFYDLLNGQKKVVNQDA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKFLQQLTMKIGLPRTVENLLADGDIDAVWVFDRKLDALVGPGVYGADRRD GPNEKELGPVRLVIADGQTRHVESRQNLSVIAPVRNDQKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIAALGILLS IGVARYQAAPLRQITRAAVALESQKFDPALLKPVSARRDELGQLARVFTGMAGQVAAREEYLDSMVKQRTEELETRNRSL EGLSAALSKYLSPQVYSSIFSGHQDAEIASKRKKLTIFLSDIANFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPDSRGVKEDAVACVMMAIEMQEKLKQLEMEWIDAGAERPFRVRIGINTGFCTVGNFGSPDRMDYTIV GGAVNLTSRLEQNCEPGSILISHVTWSLVNDVIDAEERPALTVKGFSEPVRAYEVRGLKTSVSTDVIRKELPGMRLFIDT GTADRTEVKQTLVQVVEDLDKS >Mature_662_residues MKFTTRLVLLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEKVARLLARSASLAASIPTEVEGIIAEEMIAEGTLLGH FVEAAERAGMTPTEINRRLKSITDDTVLDEIWITDEKGHAYLHSLPDVNFTFSNSPQLQPQAYAFYDLLNGQKKVVNQDA RKRDIDNQHFKYVGVGGIDKPRIIQVGRSAKFLQQLTMKIGLPRTVENLLADGDIDAVWVFDRKLDALVGPGVYGADRRD GPNEKELGPVRLVIADGQTRHVESRQNLSVIAPVRNDQKEIVGAALVRLPMNRVWATVQSQAEIAAATASAIAALGILLS IGVARYQAAPLRQITRAAVALESQKFDPALLKPVSARRDELGQLARVFTGMAGQVAAREEYLDSMVKQRTEELETRNRSL EGLSAALSKYLSPQVYSSIFSGHQDAEIASKRKKLTIFLSDIANFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID KYVGDAVLAFFGDPDSRGVKEDAVACVMMAIEMQEKLKQLEMEWIDAGAERPFRVRIGINTGFCTVGNFGSPDRMDYTIV GGAVNLTSRLEQNCEPGSILISHVTWSLVNDVIDAEERPALTVKGFSEPVRAYEVRGLKTSVSTDVIRKELPGMRLFIDT GTADRTEVKQTLVQVVEDLDKS
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17534659, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17534657, Length=217, Percent_Identity=28.110599078341, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI133931199, Length=266, Percent_Identity=25.9398496240602, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24585694, Length=270, Percent_Identity=27.037037037037, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 72625; Mature: 72625
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTTRLVLLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEKVARLLARSASLAASIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCC TEVEGIIAEEMIAEGTLLGHFVEAAERAGMTPTEINRRLKSITDDTVLDEIWITDEKGHA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHEEEECCCCCC YLHSLPDVNFTFSNSPQLQPQAYAFYDLLNGQKKVVNQDARKRDIDNQHFKYVGVGGIDK HHHCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHCCHHHHCCCCCCCEEEEECCCCCC PRIIQVGRSAKFLQQLTMKIGLPRTVENLLADGDIDAVWVFDRKLDALVGPGVYGADRRD CCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCC GPNEKELGPVRLVIADGQTRHVESRQNLSVIAPVRNDQKEIVGAALVRLPMNRVWATVQS CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH QAEIAAATASAIAALGILLSIGVARYQAAPLRQITRAAVALESQKFDPALLKPVSARRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHH LGQLARVFTGMAGQVAAREEYLDSMVKQRTEELETRNRSLEGLSAALSKYLSPQVYSSIF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH SGHQDAEIASKRKKLTIFLSDIANFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID CCCCCHHHHHCCCEEEEEHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KYVGDAVLAFFGDPDSRGVKEDAVACVMMAIEMQEKLKQLEMEWIDAGAERPFRVRIGIN HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC TGFCTVGNFGSPDRMDYTIVGGAVNLTSRLEQNCEPGSILISHVTWSLVNDVIDAEERPA CCEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCE LTVKGFSEPVRAYEVRGLKTSVSTDVIRKELPGMRLFIDTGTADRTEVKQTLVQVVEDLD EEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC KS CC >Mature Secondary Structure MKFTTRLVLLVTVLTVGATLVTAALLTWTTRRAIITEAEASGEKVARLLARSASLAASIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCC TEVEGIIAEEMIAEGTLLGHFVEAAERAGMTPTEINRRLKSITDDTVLDEIWITDEKGHA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHEEEECCCCCC YLHSLPDVNFTFSNSPQLQPQAYAFYDLLNGQKKVVNQDARKRDIDNQHFKYVGVGGIDK HHHCCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHCCHHHHCCCCCCCEEEEECCCCCC PRIIQVGRSAKFLQQLTMKIGLPRTVENLLADGDIDAVWVFDRKLDALVGPGVYGADRRD CCEEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHHHHHCCCCCCCCCCC GPNEKELGPVRLVIADGQTRHVESRQNLSVIAPVRNDQKEIVGAALVRLPMNRVWATVQS CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH QAEIAAATASAIAALGILLSIGVARYQAAPLRQITRAAVALESQKFDPALLKPVSARRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHH LGQLARVFTGMAGQVAAREEYLDSMVKQRTEELETRNRSLEGLSAALSKYLSPQVYSSIF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH SGHQDAEIASKRKKLTIFLSDIANFTATTDKLESEDLTAMLNRYLAEMAQIALKHGATID CCCCCHHHHHCCCEEEEEHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH KYVGDAVLAFFGDPDSRGVKEDAVACVMMAIEMQEKLKQLEMEWIDAGAERPFRVRIGIN HHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC TGFCTVGNFGSPDRMDYTIVGGAVNLTSRLEQNCEPGSILISHVTWSLVNDVIDAEERPA CCEEECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCE LTVKGFSEPVRAYEVRGLKTSVSTDVIRKELPGMRLFIDTGTADRTEVKQTLVQVVEDLD EEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC KS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]