Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192290542

Identifier: 192290542

GI number: 192290542

Start: 2329253

End: 2330251

Strand: Reverse

Name: 192290542

Synonym: Rpal_2151

Alternate gene names: NA

Gene position: 2330251-2329253 (Counterclockwise)

Preceding gene: 192290543

Following gene: 192290541

Centisome position: 40.57

GC content: 65.57

Gene sequence:

>999_bases
ATGATGATCAAGACCCGTTTCACCGAAGCCTTCGGCGTCGAGCACCCGATCGTGCAAGGCGGCATGCAATGGGTCGGCCG
GGCCGAGCTGGTCGCCGCCGTGGCCAATGCCGGCGCGCTCGGCATGATCACCGCGCTGACGCAGCCGACGCCGGAAGATC
TCGCCAAGGAAATCGCGCGCTGCCGCGAGATGACCAACAAGCCGTTCGGCGTCAATCTCACCATCCTGCCGGCGATCAAG
CCGCCGCCTTACGCCGAGTATCGCCGCGTCATCATCGAGAGCGGCGTCAAGATCGTCGAGACCGCCGGTAATAAGCCACA
GGAGCACGTCGAGGACTTCAAGAAGCACGGCGTCAAGGTACTGCACAAATGTACCAGCGTCCGCCACGCGCTGTCGGCGG
AGCGGATGGGCGTCGATGGCATCTCGATCGACGGCTTCGAATGCGCCGGCCACCCGGGTGAGGATGACACCCCCGGCTTG
GTCCTGATCCCGGCCGCCGCCGACAAGATCAAGATCCCGATGATCGCCTCGGGCGGGTTCGCCGACGCGCGCGGCCTAGT
TGCGGCGCTGGCGCTCGGCGCCGACGGCATCAACATGGGCACCCGCTTCATGTGCACCAAGGAGAGCCCGATCCACCAGG
CGGTGAAGGAGAAGATCGTCGCCAATGACGAGCGCTCCACCGACCTGATCTTCCGCACCCTGCGCAACACCTCGCGGGTC
GCCAAGAATGCGATCAGCCAGCAGGTGATCGAACTGGAGAAACAGGGCGCGACCTTCGAGCAGGTCAAGGAGCTGGTGGC
CGGCTCGCGCGGCAAGATGGTCTATGTCAACGGCGATACCGACGAAGGCGTATGGTCGGCGGGCATGGTGCAGGGCCTGA
TCCATGATATTCCAAGCTGCGCCGAGCTGGTGTCGCGGATCGTGCGCGAAGCGGAAGCGATCATCCGCGGCCGGCTCGAA
GCGCTGCTCTCGGGCGGCGCGCGCGAGGCCGCGGAGTAA

Upstream 100 bases:

>100_bases
CCCCTCCCCACACATTGGACATTTCGCCGTCGCTTCGGCAATCTCCCGGCGCCAGCAACAGCAACAGGCGCGTCAGGCGC
CGGAATGTCCAAGGGGGACC

Downstream 100 bases:

>100_bases
GACGCGCGCCGGATCGGCGCAGCGAAACAGGACGAGCTTGCGATGAAAGCCTATGTCTACGGCGCCGGTGGCGCCGCCAT
CACCGAAGTCGACAAGCCGG

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MMIKTRFTEAFGVEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLAKEIARCREMTNKPFGVNLTILPAIK
PPPYAEYRRVIIESGVKIVETAGNKPQEHVEDFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGL
VLIPAAADKIKIPMIASGGFADARGLVAALALGADGINMGTRFMCTKESPIHQAVKEKIVANDERSTDLIFRTLRNTSRV
AKNAISQQVIELEKQGATFEQVKELVAGSRGKMVYVNGDTDEGVWSAGMVQGLIHDIPSCAELVSRIVREAEAIIRGRLE
ALLSGGAREAAE

Sequences:

>Translated_332_residues
MMIKTRFTEAFGVEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLAKEIARCREMTNKPFGVNLTILPAIK
PPPYAEYRRVIIESGVKIVETAGNKPQEHVEDFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGL
VLIPAAADKIKIPMIASGGFADARGLVAALALGADGINMGTRFMCTKESPIHQAVKEKIVANDERSTDLIFRTLRNTSRV
AKNAISQQVIELEKQGATFEQVKELVAGSRGKMVYVNGDTDEGVWSAGMVQGLIHDIPSCAELVSRIVREAEAIIRGRLE
ALLSGGAREAAE
>Mature_332_residues
MMIKTRFTEAFGVEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLAKEIARCREMTNKPFGVNLTILPAIK
PPPYAEYRRVIIESGVKIVETAGNKPQEHVEDFKKHGVKVLHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGL
VLIPAAADKIKIPMIASGGFADARGLVAALALGADGINMGTRFMCTKESPIHQAVKEKIVANDERSTDLIFRTLRNTSRV
AKNAISQQVIELEKQGATFEQVKELVAGSRGKMVYVNGDTDEGVWSAGMVQGLIHDIPSCAELVSRIVREAEAIIRGRLE
ALLSGGAREAAE

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 35626; Mature: 35626

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIKTRFTEAFGVEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLAKEIAR
CCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
CREMTNKPFGVNLTILPAIKPPPYAEYRRVIIESGVKIVETAGNKPQEHVEDFKKHGVKV
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHH
LHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLVLIPAAADKIKIPMIASGGF
HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC
ADARGLVAALALGADGINMGTRFMCTKESPIHQAVKEKIVANDERSTDLIFRTLRNTSRV
CHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AKNAISQQVIELEKQGATFEQVKELVAGSRGKMVYVNGDTDEGVWSAGMVQGLIHDIPSC
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHH
AELVSRIVREAEAIIRGRLEALLSGGAREAAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MMIKTRFTEAFGVEHPIVQGGMQWVGRAELVAAVANAGALGMITALTQPTPEDLAKEIAR
CCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
CREMTNKPFGVNLTILPAIKPPPYAEYRRVIIESGVKIVETAGNKPQEHVEDFKKHGVKV
HHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHH
LHKCTSVRHALSAERMGVDGISIDGFECAGHPGEDDTPGLVLIPAAADKIKIPMIASGGF
HHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC
ADARGLVAALALGADGINMGTRFMCTKESPIHQAVKEKIVANDERSTDLIFRTLRNTSRV
CHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AKNAISQQVIELEKQGATFEQVKELVAGSRGKMVYVNGDTDEGVWSAGMVQGLIHDIPSC
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHH
AELVSRIVREAEAIIRGRLEALLSGGAREAAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]