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The map label for this gene is 192290474

Identifier: 192290474

GI number: 192290474

Start: 2251076

End: 2252221

Strand: Reverse

Name: 192290474

Synonym: Rpal_2081

Alternate gene names: NA

Gene position: 2252221-2251076 (Counterclockwise)

Preceding gene: 192290475

Following gene: 192290473

Centisome position: 39.21

GC content: 65.62

Gene sequence:

>1146_bases
GTGACCGGGACGCGCGCCCTCAGGATCTGGAGCAAGGTCCACACCTGGACCTCGCTTATCAGCATGCTGTTCCTGCTGAT
GCTGTGCCTCACCGGTCTGCCGCTGATCTTCCACGAAGAGATCGAGGAGCTGACCGAACAACAGTTCGCCGCGCCGCACC
TGCCGGGCAACGTCCCGGCCGCGCCAGTCGACGACGTGCTCCTTGCCGCACAGCAGGCCCGCCCCGGCGATCACGTGCTG
TTCGTCACCTGGCGCGACGAGCAACCGTCCGTCGTCGTGGTCACGATGTCGCCGACGCCGAAGCCGATGCGCGGCAAGTT
CTATCGGCTGGTGATGGACGGCCGCACAAAGGCGGTGCTGGGCGAAGAGCGGCCGCAGCAGGGCGTGATGGACATCATTT
TGCTGCTTCACAAGAACATGCTGCTGGAATTGCCCGGCGAGCTGTTCCTCGGCGCGATGGGCCTGCTGCTAGTGGTGTCG
ATCGTCTCGGGCGTCGTGGTCTATGCGCCGTTCATGCGCCGGCTTGCCTTTGGCACCGTGCGCCAGCGCTCGCGGCGGCT
GAAGTGGCTCGACCTGCATAATCTGTTCGGCATCGTCACCACGGTCTGGCTGGTCGTGGTCGGCGCCACCGGCGCGATCA
ATACGCTGGCGATGCCGATGTACGACTACTGGCGCGGCCAAGTGCTGCCGCCTCTGTTGGCACCTTATCGCGGTGCGCCG
GTGGCCCAGCCTTCCTCGCTTGATCAGGCGATCGCGCGGGTCCGCGCTGCTCTGCCGGAGGGGCGTCTGTCCTCAATCAC
GATGCCAACCGCGGAGAATTTCGGCAGCCCCCGCCATCTCGTGGTTTGGATGAAGGGCAACTCCGCGATCACGGCGCTGA
TCGCCACCCCGACGCTGGTCGATGTCGACCAAACCGTGCCCGTGCTGGTGCCGCAGATGCCTTGGTACTTGACGTTGCTG
CAGATGTCGCGGCCGCTGCATTTCGGCGACTATGGTGGGCTGCCCCTCAAAGTCCTCTGGGGGCTGCTCGACCTCGTCTG
CATCGTCGTGCTGATCACCGGGCTTTATCTCTGGGTCGCCAAACAACGCTTCGGCGGCAGCGTCCGCAGCCGCACCGCGG
CGCCATCCGACGCGAGGCCGGCATGA

Upstream 100 bases:

>100_bases
TCAAGAACATCGTCAACAAGGACAACGCGATGTGCACCGCCACCGGCGGCTGCCAGTACATCTCCCCGCGGGTGATCACC
GCGACCGCGAGCTATCGCTG

Downstream 100 bases:

>100_bases
CCACACCCCGCAGAGCCTCCCACACCACCGCACAGATCTTCGCCGCGCCGCTCGCGATCGGCGTCATCACCGCCCTCGGG
CTGACGACAGCGTTGCTCGG

Product: PepSY-associated TM helix domain-containing protein

Products: NA

Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTGTRALRIWSKVHTWTSLISMLFLLMLCLTGLPLIFHEEIEELTEQQFAAPHLPGNVPAAPVDDVLLAAQQARPGDHVL
FVTWRDEQPSVVVVTMSPTPKPMRGKFYRLVMDGRTKAVLGEERPQQGVMDIILLLHKNMLLELPGELFLGAMGLLLVVS
IVSGVVVYAPFMRRLAFGTVRQRSRRLKWLDLHNLFGIVTTVWLVVVGATGAINTLAMPMYDYWRGQVLPPLLAPYRGAP
VAQPSSLDQAIARVRAALPEGRLSSITMPTAENFGSPRHLVVWMKGNSAITALIATPTLVDVDQTVPVLVPQMPWYLTLL
QMSRPLHFGDYGGLPLKVLWGLLDLVCIVVLITGLYLWVAKQRFGGSVRSRTAAPSDARPA

Sequences:

>Translated_381_residues
MTGTRALRIWSKVHTWTSLISMLFLLMLCLTGLPLIFHEEIEELTEQQFAAPHLPGNVPAAPVDDVLLAAQQARPGDHVL
FVTWRDEQPSVVVVTMSPTPKPMRGKFYRLVMDGRTKAVLGEERPQQGVMDIILLLHKNMLLELPGELFLGAMGLLLVVS
IVSGVVVYAPFMRRLAFGTVRQRSRRLKWLDLHNLFGIVTTVWLVVVGATGAINTLAMPMYDYWRGQVLPPLLAPYRGAP
VAQPSSLDQAIARVRAALPEGRLSSITMPTAENFGSPRHLVVWMKGNSAITALIATPTLVDVDQTVPVLVPQMPWYLTLL
QMSRPLHFGDYGGLPLKVLWGLLDLVCIVVLITGLYLWVAKQRFGGSVRSRTAAPSDARPA
>Mature_380_residues
TGTRALRIWSKVHTWTSLISMLFLLMLCLTGLPLIFHEEIEELTEQQFAAPHLPGNVPAAPVDDVLLAAQQARPGDHVLF
VTWRDEQPSVVVVTMSPTPKPMRGKFYRLVMDGRTKAVLGEERPQQGVMDIILLLHKNMLLELPGELFLGAMGLLLVVSI
VSGVVVYAPFMRRLAFGTVRQRSRRLKWLDLHNLFGIVTTVWLVVVGATGAINTLAMPMYDYWRGQVLPPLLAPYRGAPV
AQPSSLDQAIARVRAALPEGRLSSITMPTAENFGSPRHLVVWMKGNSAITALIATPTLVDVDQTVPVLVPQMPWYLTLLQ
MSRPLHFGDYGGLPLKVLWGLLDLVCIVVLITGLYLWVAKQRFGGSVRSRTAAPSDARPA

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42101; Mature: 41969

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTRALRIWSKVHTWTSLISMLFLLMLCLTGLPLIFHEEIEELTEQQFAAPHLPGNVPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
APVDDVLLAAQQARPGDHVLFVTWRDEQPSVVVVTMSPTPKPMRGKFYRLVMDGRTKAVL
CCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHC
GEERPQQGVMDIILLLHKNMLLELPGELFLGAMGLLLVVSIVSGVVVYAPFMRRLAFGTV
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRSRRLKWLDLHNLFGIVTTVWLVVVGATGAINTLAMPMYDYWRGQVLPPLLAPYRGAP
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCC
VAQPSSLDQAIARVRAALPEGRLSSITMPTAENFGSPRHLVVWMKGNSAITALIATPTLV
CCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHCCCCCCEEEEEEECCCEEEEEEECCCEE
DVDQTVPVLVPQMPWYLTLLQMSRPLHFGDYGGLPLKVLWGLLDLVCIVVLITGLYLWVA
ECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRFGGSVRSRTAAPSDARPA
HHHHCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
TGTRALRIWSKVHTWTSLISMLFLLMLCLTGLPLIFHEEIEELTEQQFAAPHLPGNVPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
APVDDVLLAAQQARPGDHVLFVTWRDEQPSVVVVTMSPTPKPMRGKFYRLVMDGRTKAVL
CCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHC
GEERPQQGVMDIILLLHKNMLLELPGELFLGAMGLLLVVSIVSGVVVYAPFMRRLAFGTV
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRSRRLKWLDLHNLFGIVTTVWLVVVGATGAINTLAMPMYDYWRGQVLPPLLAPYRGAP
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCC
VAQPSSLDQAIARVRAALPEGRLSSITMPTAENFGSPRHLVVWMKGNSAITALIATPTLV
CCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHCCCCCCEEEEEEECCCEEEEEEECCCEE
DVDQTVPVLVPQMPWYLTLLQMSRPLHFGDYGGLPLKVLWGLLDLVCIVVLITGLYLWVA
ECCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRFGGSVRSRTAAPSDARPA
HHHHCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA