| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290461
Identifier: 192290461
GI number: 192290461
Start: 2240077
End: 2240607
Strand: Reverse
Name: 192290461
Synonym: Rpal_2068
Alternate gene names: NA
Gene position: 2240607-2240077 (Counterclockwise)
Preceding gene: 192290464
Following gene: 192290460
Centisome position: 39.01
GC content: 66.48
Gene sequence:
>531_bases ATGATCGAGATTCCGCCATCCGATCTGCGCGGCAGCCGCCTCCCCGCCCTCGGCACCCAGCCGATTGCGATCGCGGCCGC TGCTCTTCTGCTGATCATCGCCGGGATCGGCACCATTTTTCTTTGGCGCATCGCCACCGGTGCCAGCCCTGAACAGGAAC GAGTCGCCGCCGGCCGCCAGGTGCAGGCCCGCGTCGCCCAGACCTCCGAACAGTTGGTGGAGCGCACCAAGGGCCTGGAG CTGACCCAGCAGCAATCGATCGACCAGTTGCAGGCGCTGCAGGATCAGCTTGCGCAGATCGAGAGGCTGGTTGCCGCCCA GCGCAGCGAAACCAAGAAGCTGTCCGAACAGGTCAGCGAGATCGGCACCAATCTCGACAGCCTGCGGCAGTCCTTCGCCC AGGCGCAGCCGGCGGACACCGCTGAGCGGCCCGCGGCACGATCGAAGCCGATCGCCAACGCCTCGCGCGCCAAGGCCAAG AAACCGCGCGCCGCCAAATCGCAACGCAAACGCATCAAACCACGCGGATAG
Upstream 100 bases:
>100_bases ATGGCGGAGCCGCCGGCGGTTGCAACCGCCACGGGTGGGGTGGTAGCTTTCGGCCTCCTGGGGACGGGAACTTGACGTCG ACGTGAGGCTTGTGACCTCC
Downstream 100 bases:
>100_bases CTCAAATTGCATACCGCTGCTTAACCAATTTGCGACCAAGTTCGCTGGGGCAAGCGGCTAGTATGTGTGGGAGTTGACGA TGCGTAAATTTGCGGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIEIPPSDLRGSRLPALGTQPIAIAAAALLLIIAGIGTIFLWRIATGASPEQERVAAGRQVQARVAQTSEQLVERTKGLE LTQQQSIDQLQALQDQLAQIERLVAAQRSETKKLSEQVSEIGTNLDSLRQSFAQAQPADTAERPAARSKPIANASRAKAK KPRAAKSQRKRIKPRG
Sequences:
>Translated_176_residues MIEIPPSDLRGSRLPALGTQPIAIAAAALLLIIAGIGTIFLWRIATGASPEQERVAAGRQVQARVAQTSEQLVERTKGLE LTQQQSIDQLQALQDQLAQIERLVAAQRSETKKLSEQVSEIGTNLDSLRQSFAQAQPADTAERPAARSKPIANASRAKAK KPRAAKSQRKRIKPRG >Mature_176_residues MIEIPPSDLRGSRLPALGTQPIAIAAAALLLIIAGIGTIFLWRIATGASPEQERVAAGRQVQARVAQTSEQLVERTKGLE LTQQQSIDQLQALQDQLAQIERLVAAQRSETKKLSEQVSEIGTNLDSLRQSFAQAQPADTAERPAARSKPIANASRAKAK KPRAAKSQRKRIKPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19044; Mature: 19044
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIPPSDLRGSRLPALGTQPIAIAAAALLLIIAGIGTIFLWRIATGASPEQERVAAGRQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VQARVAQTSEQLVERTKGLELTQQQSIDQLQALQDQLAQIERLVAAQRSETKKLSEQVSE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGTNLDSLRQSFAQAQPADTAERPAARSKPIANASRAKAKKPRAAKSQRKRIKPRG HCCCHHHHHHHHHHCCCCCCHHCCCHHCCCCCCHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MIEIPPSDLRGSRLPALGTQPIAIAAAALLLIIAGIGTIFLWRIATGASPEQERVAAGRQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VQARVAQTSEQLVERTKGLELTQQQSIDQLQALQDQLAQIERLVAAQRSETKKLSEQVSE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGTNLDSLRQSFAQAQPADTAERPAARSKPIANASRAKAKKPRAAKSQRKRIKPRG HCCCHHHHHHHHHHCCCCCCHHCCCHHCCCCCCHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA