| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290349
Identifier: 192290349
GI number: 192290349
Start: 2111875
End: 2113389
Strand: Reverse
Name: 192290349
Synonym: Rpal_1956
Alternate gene names: NA
Gene position: 2113389-2111875 (Counterclockwise)
Preceding gene: 192290350
Following gene: 192290339
Centisome position: 36.79
GC content: 68.18
Gene sequence:
>1515_bases ATGCCGACCACGCTCCCGCCCGAACGCATTCCCGTCATCGCCGGTGTCGGCGAAATCGCAGACCACCCCAAGGACATCGC GCAAGGGCTGGAGCCGCTGGCGCTGCTCGAAGCCGCCGTGCAACGCGCCGGCGACGACAGCGCCGCAAGCCTGCTGCCAC AGATCGACTCGCTCGACGTCGTCAACTTCTTAAGCTGGCGCTACCACGCGCCAGCCGAGCAACTCGCGACACGGCTCGGC ATCGCGCCGCGTCACTGTTTCTACGGGCCGGTCGGCGGCGAGAGCCCGATCCGCTTCATCCACGAAGCCGCGCTGCGGAT CGCCCGCGGCGAAGCACAGGTCGCCGTGGTCTGTGGCGCCGAGGCGCAGTCAACGGCGACCAAAGCTGCGCGAGCCAAGA TCGACCTGCCGTGGACGCCGTTCGCCCATGACGCACCGGAGCCGAAGCGCGGCGCGGCCTTCCAGCAGCCGATCGCTTCG ACCCTCGGGGTCGCAAGGCCGATCACGGTATATCCACTGTACGAAGCCGCCACCGCTGCGCATTGGGGCCAGACACCGCG GCAGGCACTGGATGAGTCCGGCGTGCTGTGGTCGCGCTACGCAGCGGCGGCGGAACGCAATCCGAACGCCTGGATCAAGC GCGCCTTTGCGCCGAACGAGATCACGACGCCTTCATCCGACAATCGGCTGATCGCCTGGCCCTACACCAAGCTGATGGTC GCCAATCCGAGCGTCAATCTCGGCGCCGCGGTGCTGCTGACTTCGCTGGCGAAAGCGCGCGCAGCCGGCATCCCCGAGGA CAAGCTGATCTATATCCACGGCGGCGCCTCTGCCGAAGAGCCGCGTGACTATCTCGCCCGCGATCAGTTCGTGCAGAGCC ACGCCCAGAATGCGGTGCTGGAGACCATCAAGGCGATGGTCGGTGGCGACGGCCGCGCGTTCGACGCAATCGAGCTGTAT TCGTGCTTCCCAGTGGTGCCGAAGATGGCGCGGCGGACGCTCGGTCTCGGCGACGACGTCGAGCCGACGGTGACGGGCGG CCTCACCTTCTTCGGCGCGCCGCTCAACACCTACATGACCCATGCCGCCTGCGCGATGGTCCGCCGCCTGCGCGACGGCG CCCAGCTCGGCCTGCTGTACGGCCAGGGCGGCTTCGTCACCAAGCATCATGGCCTCATCGTTTCGCGCACCCCACCGCAG CAGCCGTTGAGCGAAGACGTCAGCGTGCAGGCGAAGGCCGATGCGGCCTATGGCGTCGTGCCGCGGTTCGTCACCGAAGC CAGCGGTGACGGCACGGTCGAAACCTTCACGGTGGTCTATGACGGCCGTGGCGAAGTCCAGCATGGCGTCGTGATGCTGC GCACCGTCGACGGCGCCCGCGCTCTAGCGCGCGTGCCGGCGCAGGATCAGGCGACGCTGGCGTTCCTGACCGACATGGAC CGCAGTCCGGTCGGCACCCGCGGACCGATCGTCACGGCAGCCGATGGTGTGCTGGAGTGGCGTAGCGCCGGTTAG
Upstream 100 bases:
>100_bases GGCGTCGTCGTATCACACCGCCGATACTTTCGTGATCGACGGCGGCTACACCGCGTTCTGACATCCACTTACCAACCTTC GATCAATAAGAAGCAAGAAA
Downstream 100 bases:
>100_bases TTCGGATCATCAGGGAGAGCCAAGCCAAAAGTCCTCTCCGTCATTGCGAGCGAAGCGAAGCAATCCAGGGCCGCGGTGCA CGGAGCTCCTGGATTGCTTC
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGDDSAASLLPQIDSLDVVNFLSWRYHAPAEQLATRLG IAPRHCFYGPVGGESPIRFIHEAALRIARGEAQVAVVCGAEAQSTATKAARAKIDLPWTPFAHDAPEPKRGAAFQQPIAS TLGVARPITVYPLYEAATAAHWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEITTPSSDNRLIAWPYTKLMV ANPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEPRDYLARDQFVQSHAQNAVLETIKAMVGGDGRAFDAIELY SCFPVVPKMARRTLGLGDDVEPTVTGGLTFFGAPLNTYMTHAACAMVRRLRDGAQLGLLYGQGGFVTKHHGLIVSRTPPQ QPLSEDVSVQAKADAAYGVVPRFVTEASGDGTVETFTVVYDGRGEVQHGVVMLRTVDGARALARVPAQDQATLAFLTDMD RSPVGTRGPIVTAADGVLEWRSAG
Sequences:
>Translated_504_residues MPTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGDDSAASLLPQIDSLDVVNFLSWRYHAPAEQLATRLG IAPRHCFYGPVGGESPIRFIHEAALRIARGEAQVAVVCGAEAQSTATKAARAKIDLPWTPFAHDAPEPKRGAAFQQPIAS TLGVARPITVYPLYEAATAAHWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEITTPSSDNRLIAWPYTKLMV ANPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEPRDYLARDQFVQSHAQNAVLETIKAMVGGDGRAFDAIELY SCFPVVPKMARRTLGLGDDVEPTVTGGLTFFGAPLNTYMTHAACAMVRRLRDGAQLGLLYGQGGFVTKHHGLIVSRTPPQ QPLSEDVSVQAKADAAYGVVPRFVTEASGDGTVETFTVVYDGRGEVQHGVVMLRTVDGARALARVPAQDQATLAFLTDMD RSPVGTRGPIVTAADGVLEWRSAG >Mature_503_residues PTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGDDSAASLLPQIDSLDVVNFLSWRYHAPAEQLATRLGI APRHCFYGPVGGESPIRFIHEAALRIARGEAQVAVVCGAEAQSTATKAARAKIDLPWTPFAHDAPEPKRGAAFQQPIAST LGVARPITVYPLYEAATAAHWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEITTPSSDNRLIAWPYTKLMVA NPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEPRDYLARDQFVQSHAQNAVLETIKAMVGGDGRAFDAIELYS CFPVVPKMARRTLGLGDDVEPTVTGGLTFFGAPLNTYMTHAACAMVRRLRDGAQLGLLYGQGGFVTKHHGLIVSRTPPQQ PLSEDVSVQAKADAAYGVVPRFVTEASGDGTVETFTVVYDGRGEVQHGVVMLRTVDGARALARVPAQDQATLAFLTDMDR SPVGTRGPIVTAADGVLEWRSAG
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53709; Mature: 53577
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGDDSAASLLPQIDSLDV CCCCCCCCCCEEEECCHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHH VNFLSWRYHAPAEQLATRLGIAPRHCFYGPVGGESPIRFIHEAALRIARGEAQVAVVCGA HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC EAQSTATKAARAKIDLPWTPFAHDAPEPKRGAAFQQPIASTLGVARPITVYPLYEAATAA CCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHH HWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEITTPSSDNRLIAWPYTKLMV HCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCEEEECCCEEEEE ANPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEPRDYLARDQFVQSHAQNAVL ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ETIKAMVGGDGRAFDAIELYSCFPVVPKMARRTLGLGDDVEPTVTGGLTFFGAPLNTYMT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEECCCHHHHHH HAACAMVRRLRDGAQLGLLYGQGGFVTKHHGLIVSRTPPQQPLSEDVSVQAKADAAYGVV HHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCCHHCCH PRFVTEASGDGTVETFTVVYDGRGEVQHGVVMLRTVDGARALARVPAQDQATLAFLTDMD HHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCC RSPVGTRGPIVTAADGVLEWRSAG CCCCCCCCCEEEECCCHHHHCCCC >Mature Secondary Structure PTTLPPERIPVIAGVGEIADHPKDIAQGLEPLALLEAAVQRAGDDSAASLLPQIDSLDV CCCCCCCCCEEEECCHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHH VNFLSWRYHAPAEQLATRLGIAPRHCFYGPVGGESPIRFIHEAALRIARGEAQVAVVCGA HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC EAQSTATKAARAKIDLPWTPFAHDAPEPKRGAAFQQPIASTLGVARPITVYPLYEAATAA CCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHH HWGQTPRQALDESGVLWSRYAAAAERNPNAWIKRAFAPNEITTPSSDNRLIAWPYTKLMV HCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCEEEECCCEEEEE ANPSVNLGAAVLLTSLAKARAAGIPEDKLIYIHGGASAEEPRDYLARDQFVQSHAQNAVL ECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ETIKAMVGGDGRAFDAIELYSCFPVVPKMARRTLGLGDDVEPTVTGGLTFFGAPLNTYMT HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEECCCHHHHHH HAACAMVRRLRDGAQLGLLYGQGGFVTKHHGLIVSRTPPQQPLSEDVSVQAKADAAYGVV HHHHHHHHHHHCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCEEEEECCCHHCCH PRFVTEASGDGTVETFTVVYDGRGEVQHGVVMLRTVDGARALARVPAQDQATLAFLTDMD HHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCC RSPVGTRGPIVTAADGVLEWRSAG CCCCCCCCCEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA