| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290233
Identifier: 192290233
GI number: 192290233
Start: 1973603
End: 1973872
Strand: Reverse
Name: 192290233
Synonym: Rpal_1837
Alternate gene names: NA
Gene position: 1973872-1973603 (Counterclockwise)
Preceding gene: 192290234
Following gene: 192290232
Centisome position: 34.36
GC content: 64.07
Gene sequence:
>270_bases ATGACCACGTTCAAGCTGGCCTGTGCCGTGATGATCCTGTCCACAGCCACCGCCGTTCCGGCGCTGGCTGGGCATCGGCA TCATCGCGCACAGCATCATCACCATCATTCGCACTACCACCAGTCGAGCTCGCCCTATCTGCATAACTATGGGCCGCCGA TCTGGCCGGGCCACACCTACGCCACCTATGACGGTCCGGTGTCGGCGCTGTGCAGTCAGGGAGCCGCCGCCTACCGGGGG CAGGACGGCCGTCGTCATCCCTGCTACTAA
Upstream 100 bases:
>100_bases GCCGAAGCCGCCGAGCGCAGCTGACGCCAACAACGTCCGCGGCGCGATGAAACCTCAGCGCGTCGGGAACGTTCCTTTTC CGGAACCAACGGAGTGTGTC
Downstream 100 bases:
>100_bases GCCCCGCACCGGGCCACCGTTTAGTTGCAACGCTCGGCGAACGGCGGCACACTCCGGCCGCGGTCGCCCGGCCGCCACGC GTTCCACGGAATCAAGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSPYLHNYGPPIWPGHTYATYDGPVSALCSQGAAAYRG QDGRRHPCY
Sequences:
>Translated_89_residues MTTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSPYLHNYGPPIWPGHTYATYDGPVSALCSQGAAAYRG QDGRRHPCY >Mature_88_residues TTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSPYLHNYGPPIWPGHTYATYDGPVSALCSQGAAAYRGQ DGRRHPCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9852; Mature: 9721
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSPYLHNYGPPIWPGHTY CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCE ATYDGPVSALCSQGAAAYRGQDGRRHPCY ECCCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTFKLACAVMILSTATAVPALAGHRHHRAQHHHHHSHYHQSSSPYLHNYGPPIWPGHTY CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCE ATYDGPVSALCSQGAAAYRGQDGRRHPCY ECCCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA