| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is mhpC [C]
Identifier: 192290234
GI number: 192290234
Start: 1973949
End: 1974950
Strand: Reverse
Name: mhpC [C]
Synonym: Rpal_1838
Alternate gene names: 192290234
Gene position: 1974950-1973949 (Counterclockwise)
Preceding gene: 192290238
Following gene: 192290233
Centisome position: 34.38
GC content: 70.26
Gene sequence:
>1002_bases ATGACGACGTTGATCTTGCTGGTGCTGAGCGTCGTCGTGCTGTTCACGGCGGCGGGCTGGGTCTCGTGCCGTCTGGCGCG CCGGCTGGAGGCGCGCTATCCGCCGCGCGGCGTGTTCATCAATGCCAACGGCGTGCGGATGCACGCGCTCGACTTATCGC CTGCACGTCCCGCCGCTTCCGGCCAGCCGACCGTCTTGCTGCTGCACGGCGCCAACCTGTGCTGCGAAGATATGCGGATG TCGCTGGGCGAGCGGCTGGCGCAGCGGCTGCGGGTGATCGTTCCGGACCGCCCCGGCCAGGGCTACAGCGTCACCGGCAC AGGCCCGGTCGCCTCGCCGGCCTATCAGGTGACGTTGATCCGCGAAGTGCTGCGCGATCGCGACGCCGGCCCGTTGATCG TGGTCGGGCATTCGTTCGGCGGCCTGATCGCGCTGCGCTATGCGCTCGACAATCCCGACACCGTCGCCGGGCTCGTTCTG ATCAATCCGACCACCCATCCCCGACCGCAGGGCCTGCCGCTGTTCCAGCGTGCCGCCGAAGTGCTGATGAAGCCGCTGGT CACCTACACACTGCTGCCGCCGCTGTCGCTGGCGATGATGAAGCGGATCTCGGCGCGGATCTTCCGGCCGGAAACGCCGC CGGCGGACTATGCCGAGCGCAGCCGGCTGGCGCTGGCGCTGACCGCCAAGCGGTTCGCCGCCAGTCTGGAAGAGTATGCC GGGCTGCGGGATCAGCTGATCGATCACGTGCCGCGCTATGGCGCCATCCAGGTGCCGACCGTGATCGTCGCCGGCACCGC CGATCCGGTGGTACCGCCGCAGGTCCACGCCGAAGCGCTGGCGCAGGCGGTGCCGCAGGCCAGGCTGCTGCGACTGAACG GCGCCGGCCACATGGCGCATCATGCCCACGCCGACACCATCGCAGCCGAGATCGAGCGGCTGGCGGATGCGGTCGCGGAG CGCGCCGCGCCGTCCCGTGCCGAAGCCGCCGAGCGCAGCTGA
Upstream 100 bases:
>100_bases GCCATTGCGAAAGATCAATTGCGACCACACGTCCGCGTGCTCAATTTCGGCTGCCGCTGCGGGCTCGACCGCGGCCGATT CTCTATGGCCGAAGGATACG
Downstream 100 bases:
>100_bases CGCCAACAACGTCCGCGGCGCGATGAAACCTCAGCGCGTCGGGAACGTTCCTTTTCCGGAACCAACGGAGTGTGTCATGA CCACGTTCAAGCTGGCCTGT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGVRMHALDLSPARPAASGQPTVLLLHGANLCCEDMRM SLGERLAQRLRVIVPDRPGQGYSVTGTGPVASPAYQVTLIREVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVL INPTTHPRPQGLPLFQRAAEVLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSRLALALTAKRFAASLEEYA GLRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALAQAVPQARLLRLNGAGHMAHHAHADTIAAEIERLADAVAE RAAPSRAEAAERS
Sequences:
>Translated_333_residues MTTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGVRMHALDLSPARPAASGQPTVLLLHGANLCCEDMRM SLGERLAQRLRVIVPDRPGQGYSVTGTGPVASPAYQVTLIREVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVL INPTTHPRPQGLPLFQRAAEVLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSRLALALTAKRFAASLEEYA GLRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALAQAVPQARLLRLNGAGHMAHHAHADTIAAEIERLADAVAE RAAPSRAEAAERS >Mature_332_residues TTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGVRMHALDLSPARPAASGQPTVLLLHGANLCCEDMRMS LGERLAQRLRVIVPDRPGQGYSVTGTGPVASPAYQVTLIREVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVLI NPTTHPRPQGLPLFQRAAEVLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSRLALALTAKRFAASLEEYAG LRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALAQAVPQARLLRLNGAGHMAHHAHADTIAAEIERLADAVAER AAPSRAEAAERS
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 35838; Mature: 35707
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGVRMHALDLSPARPAAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCC GQPTVLLLHGANLCCEDMRMSLGERLAQRLRVIVPDRPGQGYSVTGTGPVASPAYQVTLI CCCEEEEEECCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCHHHHHHH REVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVLINPTTHPRPQGLPLFQRAAE HHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH VLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSRLALALTAKRFAASLEEYA HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH GLRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALAQAVPQARLLRLNGAGHMAH CHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHCCHHEEEEECCCCCCHH HAHADTIAAEIERLADAVAERAAPSRAEAAERS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure TTLILLVLSVVVLFTAAGWVSCRLARRLEARYPPRGVFINANGVRMHALDLSPARPAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCC GQPTVLLLHGANLCCEDMRMSLGERLAQRLRVIVPDRPGQGYSVTGTGPVASPAYQVTLI CCCEEEEEECCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEEECCCCCCCCHHHHHHH REVLRDRDAGPLIVVGHSFGGLIALRYALDNPDTVAGLVLINPTTHPRPQGLPLFQRAAE HHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH VLMKPLVTYTLLPPLSLAMMKRISARIFRPETPPADYAERSRLALALTAKRFAASLEEYA HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH GLRDQLIDHVPRYGAIQVPTVIVAGTADPVVPPQVHAEALAQAVPQARLLRLNGAGHMAH CHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHCCHHEEEEECCCCCCHH HAHADTIAAEIERLADAVAERAAPSRAEAAERS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]