| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290184
Identifier: 192290184
GI number: 192290184
Start: 1921602
End: 1922783
Strand: Reverse
Name: 192290184
Synonym: Rpal_1787
Alternate gene names: NA
Gene position: 1922783-1921602 (Counterclockwise)
Preceding gene: 192290185
Following gene: 192290179
Centisome position: 33.47
GC content: 63.03
Gene sequence:
>1182_bases GTGACTGTAACCTATCCCACCACCGGCGGCATGACCGCGAACGCAGCTTCGCATGTGCGCGACCTGTCGCTCGACCGAAC CCGCACCTTCCTCACCATCCTGGTGCTGATCCACCATTCGGTGATCCCCTACACCTATTTCGGCCACACCGACCCGAGCT CGTTCATCGGCTTCGATTGCGTAGTGCTCGCCACCGACAGCTTCTTCATGGCGATGTTCTTCATGCTGTCGGGGCTGTTC TTGTGGCCGAGCCTCGACCACCGGCCGAAATTCGGTTCGTTGGCGCGCGACCGGCTGATCCGGCTCGGCATCCCGTTCGT GATCGCGGCGTTCACCGTGATCCCGATCGCCTACTACGCGCTGGCGCTGCGCGCCGACCCGACCGAGAGCTTCGCCAAAT TCTACGAGAACATGATCACGGTCGGCCCGTGGCCGAGCGGACCGTTGTGGTTTCTGTGGGTGCTGTTCATCTTCAGCGTG ATCGGCGGCGCGCTGTACCGGATTTCGCGGCATTCGCTCGATCCGATCAATCATCTGGCCAAGCTCGGCTACAAGTCGCC CGCGCTGTTCATCGGCACGGTGTTCCTGGTCACTGCAATTCTCTATGTGCCGTCGCGGCTGTACTACACCTCGACCTATT GGTTCGAATGGGGCCCGTTTGCGGTGCAGGCCAGCCGGGTGCTGCTGTACACCGCGTATTTCTTCATCGGCGCCGGCATC GGCGCCTGCCATCCCGAGCAGAGCGTGCTCGGCGCCGGCGGCAAGCTGGCGCAGCAATGGTGGATCTGGCTGCTGGTGGC ACTGGTGCCGTATCTCAGCATGTGGGGCCTGATCGGCATCAAGCGCGGCATCCTCGACAATCCCGACGATCTGCCGATGT GGTACGAGGCGAGCTACAGCGTCGCCCTCACCGCCTTCAGCGCCGCGATCATCTTCGCCATCCTGGCGGTTTTCCTGCGC TTCCGCCGCGGCGGCTGGAGCCTGCTCGACCCCTTGCAGCACGACGCCTACGGCATCTTCCTGGTGCACTACGCCTATAT GCTGTGGCTGCAGTACTGGCTGTACGACTACGACCTGCCGGCGATCGTCAAAGCCGCCATCGTGTTCACCCTCGGCCTGC TGCTGAGCTGGGCGACGACCTATCTGCTGCGGAAGATTCCGGGCGCGTATCGGGTGCTATAG
Upstream 100 bases:
>100_bases TTCAAATCGAAGAATTCAAACCCTAGCAATTCGCCGAAGAGGCGATTCAGCTATTGCGCAGTATCGTAATTCACCGGCGG CATCGCACGGGGCTATCGTC
Downstream 100 bases:
>100_bases ACCCTTCCTCCGTCATTCCGGGGCGCGAGCGTCAGCTCGCGAGCCCGGAATTAGTAGCCACCCAATCTGTTGCTCGCGCA CGGCATCACCTGCCGTGCTC
Product: acyltransferase 3
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYTYFGHTDPSSFIGFDCVVLATDSFFMAMFFMLSGLF LWPSLDHRPKFGSLARDRLIRLGIPFVIAAFTVIPIAYYALALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSV IGGALYRISRHSLDPINHLAKLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAVQASRVLLYTAYFFIGAGI GACHPEQSVLGAGGKLAQQWWIWLLVALVPYLSMWGLIGIKRGILDNPDDLPMWYEASYSVALTAFSAAIIFAILAVFLR FRRGGWSLLDPLQHDAYGIFLVHYAYMLWLQYWLYDYDLPAIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL
Sequences:
>Translated_393_residues MTVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYTYFGHTDPSSFIGFDCVVLATDSFFMAMFFMLSGLF LWPSLDHRPKFGSLARDRLIRLGIPFVIAAFTVIPIAYYALALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSV IGGALYRISRHSLDPINHLAKLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAVQASRVLLYTAYFFIGAGI GACHPEQSVLGAGGKLAQQWWIWLLVALVPYLSMWGLIGIKRGILDNPDDLPMWYEASYSVALTAFSAAIIFAILAVFLR FRRGGWSLLDPLQHDAYGIFLVHYAYMLWLQYWLYDYDLPAIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL >Mature_392_residues TVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYTYFGHTDPSSFIGFDCVVLATDSFFMAMFFMLSGLFL WPSLDHRPKFGSLARDRLIRLGIPFVIAAFTVIPIAYYALALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSVI GGALYRISRHSLDPINHLAKLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAVQASRVLLYTAYFFIGAGIG ACHPEQSVLGAGGKLAQQWWIWLLVALVPYLSMWGLIGIKRGILDNPDDLPMWYEASYSVALTAFSAAIIFAILAVFLRF RRGGWSLLDPLQHDAYGIFLVHYAYMLWLQYWLYDYDLPAIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44459; Mature: 44327
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYTYFGHTDPSSFIGFDC CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCEE VVLATDSFFMAMFFMLSGLFLWPSLDHRPKFGSLARDRLIRLGIPFVIAAFTVIPIAYYA EEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH LALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSVIGGALYRISRHSLDPINHLA HHHCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAVQASRVLLYTAYFFIGAGI HCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC GACHPEQSVLGAGGKLAQQWWIWLLVALVPYLSMWGLIGIKRGILDNPDDLPMWYEASYS CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHH VALTAFSAAIIFAILAVFLRFRRGGWSLLDPLQHDAYGIFLVHYAYMLWLQYWLYDYDLP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure TVTYPTTGGMTANAASHVRDLSLDRTRTFLTILVLIHHSVIPYTYFGHTDPSSFIGFDC EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCEE VVLATDSFFMAMFFMLSGLFLWPSLDHRPKFGSLARDRLIRLGIPFVIAAFTVIPIAYYA EEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH LALRADPTESFAKFYENMITVGPWPSGPLWFLWVLFIFSVIGGALYRISRHSLDPINHLA HHHCCCCHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KLGYKSPALFIGTVFLVTAILYVPSRLYYTSTYWFEWGPFAVQASRVLLYTAYFFIGAGI HCCCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC GACHPEQSVLGAGGKLAQQWWIWLLVALVPYLSMWGLIGIKRGILDNPDDLPMWYEASYS CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHH VALTAFSAAIIFAILAVFLRFRRGGWSLLDPLQHDAYGIFLVHYAYMLWLQYWLYDYDLP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIVKAAIVFTLGLLLSWATTYLLRKIPGAYRVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA