Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290185

Identifier: 192290185

GI number: 192290185

Start: 1922858

End: 1923220

Strand: Reverse

Name: 192290185

Synonym: Rpal_1788

Alternate gene names: NA

Gene position: 1923220-1922858 (Counterclockwise)

Preceding gene: 192290187

Following gene: 192290184

Centisome position: 33.48

GC content: 60.88

Gene sequence:

>363_bases
ATGAAGCTCCCAGGCCCCGATCACCCGATCTCGATCACGGCCAATCCGAACGGCGTCCGGATCCGCGCGGACGGCAAGGT
GATCGCCGAGACCCGCCGGGCGCTGACGCTGCAGGAGGCGAGCTACCCGCCGGTGCAGTACATTCCCCGGGAAGACGCCG
ACATGCGGCTGCTGGAAAAAACCGCACGTGTCACTCATTGCCCGTACAAGGGCGATGCCAGCTATTTCAGTATCGTCGCC
GGGGGCGAACCGCAGGCCAACGCGGTCTGGAGCTACGAGAATCCATTTCCGGCTATGGCGGAGATCGCCGGTTATCTGGC
ATTCTATCCGCAAAAAGTTCAAATCGAAGAATTCAAACCCTAG

Upstream 100 bases:

>100_bases
CATCCTATATGGCAGTGCGTCCCTTTCAAAGCCACCACGCCGGCTCATCGCGGCGAGGTGATGGTGACGCTGGTCCGAAT
CGCACCCGAGAGATCCGCCC

Downstream 100 bases:

>100_bases
CAATTCGCCGAAGAGGCGATTCAGCTATTGCGCAGTATCGTAATTCACCGGCGGCATCGCACGGGGCTATCGTCGTGACT
GTAACCTATCCCACCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKLPGPDHPISITANPNGVRIRADGKVIAETRRALTLQEASYPPVQYIPREDADMRLLEKTARVTHCPYKGDASYFSIVA
GGEPQANAVWSYENPFPAMAEIAGYLAFYPQKVQIEEFKP

Sequences:

>Translated_120_residues
MKLPGPDHPISITANPNGVRIRADGKVIAETRRALTLQEASYPPVQYIPREDADMRLLEKTARVTHCPYKGDASYFSIVA
GGEPQANAVWSYENPFPAMAEIAGYLAFYPQKVQIEEFKP
>Mature_120_residues
MKLPGPDHPISITANPNGVRIRADGKVIAETRRALTLQEASYPPVQYIPREDADMRLLEKTARVTHCPYKGDASYFSIVA
GGEPQANAVWSYENPFPAMAEIAGYLAFYPQKVQIEEFKP

Specific function: Unknown

COG id: COG2343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13350; Mature: 13350

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPGPDHPISITANPNGVRIRADGKVIAETRRALTLQEASYPPVQYIPREDADMRLLEK
CCCCCCCCCEEEEECCCCEEEEECCEEEECHHHEEEEECCCCCCEEECCCCCCHHHHHHH
TARVTHCPYKGDASYFSIVAGGEPQANAVWSYENPFPAMAEIAGYLAFYPQKVQIEEFKP
HHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MKLPGPDHPISITANPNGVRIRADGKVIAETRRALTLQEASYPPVQYIPREDADMRLLEK
CCCCCCCCCEEEEECCCCEEEEECCEEEECHHHEEEEECCCCCCEEECCCCCCHHHHHHH
TARVTHCPYKGDASYFSIVAGGEPQANAVWSYENPFPAMAEIAGYLAFYPQKVQIEEFKP
HHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA