| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290060
Identifier: 192290060
GI number: 192290060
Start: 1781839
End: 1782078
Strand: Reverse
Name: 192290060
Synonym: Rpal_1662
Alternate gene names: NA
Gene position: 1782078-1781839 (Counterclockwise)
Preceding gene: 192290068
Following gene: 192290059
Centisome position: 31.02
GC content: 67.08
Gene sequence:
>240_bases ATGCCGACGTCCGCCAAGAGCAATGCTTGCAGACCGTGGGACGACGAACAGGTCGAGCGGTTGAAGGAGCTGATTGCCAG CGGCGCATCGGCGGTGCGCGCGGCAGCCGCTCTGAAGCGCGCGCGCTCATCGGTGCAGGTGAAGGCGCGCAAGCTCGGCA TGCCGTTCATGGCCAGCCGCGATGCCAAGCGCATCCGCAACGCCAAGATTGCCGAAGCCGAAAGCCGCCTCGCGCGCTGA
Upstream 100 bases:
>100_bases TCACCGACCCGCCAGCTGCAGAGCTTCGCGCACCAACCTTCACATGCCCTGCCCGCGCGCTTCCACCGGCGAGCGGGCCC GACAGCGAAAGGAGCTGCTG
Downstream 100 bases:
>100_bases CTTTCTGCGGTACGATCATGCTGGATAATCAGCGCCTGATCGCCGGGTCGCGGCAGGCTGTCGCACCCGACGATCGTTCC ACGTCAGGATACACCATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPTSAKSNACRPWDDEQVERLKELIASGASAVRAAAALKRARSSVQVKARKLGMPFMASRDAKRIRNAKIAEAESRLAR
Sequences:
>Translated_79_residues MPTSAKSNACRPWDDEQVERLKELIASGASAVRAAAALKRARSSVQVKARKLGMPFMASRDAKRIRNAKIAEAESRLAR >Mature_78_residues PTSAKSNACRPWDDEQVERLKELIASGASAVRAAAALKRARSSVQVKARKLGMPFMASRDAKRIRNAKIAEAESRLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8652; Mature: 8521
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSAKSNACRPWDDEQVERLKELIASGASAVRAAAALKRARSSVQVKARKLGMPFMASR CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DAKRIRNAKIAEAESRLAR HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTSAKSNACRPWDDEQVERLKELIASGASAVRAAAALKRARSSVQVKARKLGMPFMASR CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH DAKRIRNAKIAEAESRLAR HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA