| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is 192290059
Identifier: 192290059
GI number: 192290059
Start: 1781121
End: 1781585
Strand: Reverse
Name: 192290059
Synonym: Rpal_1661
Alternate gene names: NA
Gene position: 1781585-1781121 (Counterclockwise)
Preceding gene: 192290060
Following gene: 192290058
Centisome position: 31.02
GC content: 64.95
Gene sequence:
>465_bases ATGCAATACTGGATCATTGCATTCACGGCCGCGCTGGTCGTGGTCATCGGTTACGCCGCCGGTCCGGTCGGCGCGCTGGT CTCGCTGCTCGCTTTCGCGGGCTCGCTGTATCTGATGTGGGCGCGCAAGCTGGGCTTCGCTGGCGCGTGGACGCGGTTCG CTCTGGATCGGTTCTCCGCTCCGTTCTGGAAGGGCGAGAACTGGGAACGCTTCAACGCCATGTTCCACGACGGTGAGAGC GTGGTGAAGGCCGGCACGGTGGCTACCGCGCTGATCGCGCTATCGCTGATCCTGCCGCCAAGCCAGGTCGCGCTGATCGC TGCCGTGGTCGCCGCGTGGTACGCGTTCGAAGTCTATCGCAGCCACCGTCCGGTGGTTCGCCCGACCACCGCAATCGAAG CCAAGCCGGCCAACGACAGCGTGCTGTACACCCAGGTCCGCAACGAGAGCGCCAAGATCAACTGA
Upstream 100 bases:
>100_bases TTGCGGCGCCGCTGTGGAAAACAGCCCATAATGCGCCGGCTAACGCCGCCATCGAATCAAATTTGAAAGGCGCCCGCCAA GCGGGTGAAAGGGTCACACA
Downstream 100 bases:
>100_bases TCGCCTCTGGCGGATCGTTCGAGCCACTGACGACGCAGGCGGCGGGGATTTCCCCGCCGCTTTTGTTTTGGCCGCTAGCC GTCGGCGACCATGGGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQYWIIAFTAALVVVIGYAAGPVGALVSLLAFAGSLYLMWARKLGFAGAWTRFALDRFSAPFWKGENWERFNAMFHDGES VVKAGTVATALIALSLILPPSQVALIAAVVAAWYAFEVYRSHRPVVRPTTAIEAKPANDSVLYTQVRNESAKIN
Sequences:
>Translated_154_residues MQYWIIAFTAALVVVIGYAAGPVGALVSLLAFAGSLYLMWARKLGFAGAWTRFALDRFSAPFWKGENWERFNAMFHDGES VVKAGTVATALIALSLILPPSQVALIAAVVAAWYAFEVYRSHRPVVRPTTAIEAKPANDSVLYTQVRNESAKIN >Mature_154_residues MQYWIIAFTAALVVVIGYAAGPVGALVSLLAFAGSLYLMWARKLGFAGAWTRFALDRFSAPFWKGENWERFNAMFHDGES VVKAGTVATALIALSLILPPSQVALIAAVVAAWYAFEVYRSHRPVVRPTTAIEAKPANDSVLYTQVRNESAKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16823; Mature: 16823
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYWIIAFTAALVVVIGYAAGPVGALVSLLAFAGSLYLMWARKLGFAGAWTRFALDRFSA CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PFWKGENWERFNAMFHDGESVVKAGTVATALIALSLILPPSQVALIAAVVAAWYAFEVYR CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SHRPVVRPTTAIEAKPANDSVLYTQVRNESAKIN CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MQYWIIAFTAALVVVIGYAAGPVGALVSLLAFAGSLYLMWARKLGFAGAWTRFALDRFSA CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PFWKGENWERFNAMFHDGESVVKAGTVATALIALSLILPPSQVALIAAVVAAWYAFEVYR CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SHRPVVRPTTAIEAKPANDSVLYTQVRNESAKIN CCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA