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The map label for this gene is 192289986

Identifier: 192289986

GI number: 192289986

Start: 1695225

End: 1697048

Strand: Reverse

Name: 192289986

Synonym: Rpal_1587

Alternate gene names: NA

Gene position: 1697048-1695225 (Counterclockwise)

Preceding gene: 192289987

Following gene: 192289981

Centisome position: 29.54

GC content: 67.54

Gene sequence:

>1824_bases
ATGTCGGCTGCTGAACTCACCACCTTCCCGACGATCGCGTCGCTGCACACCGCCTATGCGGCCGGCGCCTCTCCGGCCGA
GATCATCGCAGCGACGTATCGCCAGCTCGAAGCCGTGGCCGATCCCGGCATCTTCATCACGCTGCGGCCAGAGCACGACG
TCCTTGCCGACGCCGCCGCACTCGGCCAGTTCGATCCCGATACGAAGCCACTGTGGGGCATCCCATTCGCCGTGAAGGAC
AATATCGACGTCGCGTGCCTTCCGACCACGGCCGCCTGCCCCGGCTTCGCGTCCACGCCGAGCGAAACTGCGTTTGCGGT
TCAGCGCCTGCTCGATGCCGGCGCGGTCCTGATCGGCAAGACCAACCTCGATCAGTTCGCCACCGGACTGGTCGGCGTTC
GCACGCCATATCCAGTGCCGCGCAATGCGATCGATCCGCGCTACGTGCCCGGCGGGTCGAGCAGCGGCTCGGCCGTGGCG
GTGGCGCATGGCCTGGTGACGTTCGCGCTCGGCACCGACACCGCAGGCTCCGGCCGTGTCCCGGCCGCGCTCAACAACAT
CGTCGGACTGAAGCCATCGCTCGGCAGCGTGTCGTCGCGTGGCATGGTGCCGGCGTGCCGGACCCTCGATACGATCTCGG
TGTTCGCCGGCACGGTCGACGACGCCCACGCGATCTATCGCATCATGGCCACGTTCGACGGCGTCGATCCCTGGTCGCGG
CCGCATCCCGCAGCGGCTGCCAACCCTCCAGCCTTGCCGCCCGGTCTGCGCGTCGGTGTGCCGGATACGGTCAGCCGCAA
ATTCGCCGGCGACCTGCAGTCCGAACGAGCGTTCGACCTCGCGGTGGCGGACCTTGCGACCGTGGTGCCCGCGCCCGCTC
GTGCGGTGGATCTGTCGCCCTTGTTCGAGGTCGCCGATCTGCTCTACAGCGGACCGTGGGTCGCGGAGCGCTATCAGGCG
ATCCGACAGGTGATTGAGACGGCACCGGAGTTGCTGCATCCGGTAACACGGAAGATCATCGGCTCTGCGACGGCGTTCAG
CGCCGCCGATGCGTTTGGCGGCCTCTACCGACTGGCCGAACTGCGCCGCGCCGCTGATGCGATCTGGAGCGGCATCGACG
TGCTGATCGTACCGACCTATCCCCGCCCGCGCATGGTCGCGGAGCTGGAGGCTGATCCGATCGGTCCGAACAGCGAGCTC
GGCACCTACACCAATTTCGTGAACCTGCTCGACCTGTGCGCGCTGGCTGTGCCGAGTCGCTTCCGCGCCGATGGTTTTCC
GTCGGGCGTGACGCTGATCGCACCGGCGGGCCGCGACGACCTCCTCGCCGCGCTGGGCGAGCGCCTTCACGCCGCAAGCG
GCGTACACTTAGGCGCCAGCAGCACCAAGGTGCCGGCTTCCATCGAAGTATCGCCCTCTGCCGTTGCGAATGAGATCGAG
CTGGTGGTGGTCGGCGCACATCTGTCCGGCATGCCGCTCAATCACGAACTCATCAGCCGCGGCGCGCGTTTCCTGCGCGC
GATCCCGACCGCGCCCGACTACAAGCTGTTCGCCCTGCAGGGCGGCCCACCATTCAGGCCCGGCCTGCTGCGCGTCGCCC
CCGGCGAAGGCACCCCAATCGCAACCGAGGTTTGGGCGATCTCCGCCGAAGGATTCGGCAGCTTCGTCGCCGGCATCCCC
GCGCCTCTTGGAATCGGGACTACGCGCCTCGCCGACGGCACCGCGCCAAAGGGGTTCATCGTCGAAGCCGAGGGCCTGAA
AGGCGCTAGGGATATTTCGTCATTCGGCGGATGGAGGGCCTACATCAAAAGCCTTGCCGGGTAA

Upstream 100 bases:

>100_bases
CGATTCCGGCGACCGCACGCGGCATCGTCAGAGCCCTCAACGCCAAGCCGGGCCAGACGCTGCGCGCCGGCGACCTGATC
TGCGCGCTGGAGGAAGTGTG

Downstream 100 bases:

>100_bases
GGCGAGGCGCGAGACGGCCTCCTGATCTAGTGTCCGATGTCGCGGACCGCGGCCGCGGAAAGCGACGGAACGACGAATTG
CTCGTGCCCGACCACAGGCC

Product: allophanate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MSAAELTTFPTIASLHTAYAAGASPAEIIAATYRQLEAVADPGIFITLRPEHDVLADAAALGQFDPDTKPLWGIPFAVKD
NIDVACLPTTAACPGFASTPSETAFAVQRLLDAGAVLIGKTNLDQFATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVA
VAHGLVTFALGTDTAGSGRVPAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDPWSR
PHPAAAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSPLFEVADLLYSGPWVAERYQA
IRQVIETAPELLHPVTRKIIGSATAFSAADAFGGLYRLAELRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPNSEL
GTYTNFVNLLDLCALAVPSRFRADGFPSGVTLIAPAGRDDLLAALGERLHAASGVHLGASSTKVPASIEVSPSAVANEIE
LVVVGAHLSGMPLNHELISRGARFLRAIPTAPDYKLFALQGGPPFRPGLLRVAPGEGTPIATEVWAISAEGFGSFVAGIP
APLGIGTTRLADGTAPKGFIVEAEGLKGARDISSFGGWRAYIKSLAG

Sequences:

>Translated_607_residues
MSAAELTTFPTIASLHTAYAAGASPAEIIAATYRQLEAVADPGIFITLRPEHDVLADAAALGQFDPDTKPLWGIPFAVKD
NIDVACLPTTAACPGFASTPSETAFAVQRLLDAGAVLIGKTNLDQFATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVA
VAHGLVTFALGTDTAGSGRVPAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDPWSR
PHPAAAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSPLFEVADLLYSGPWVAERYQA
IRQVIETAPELLHPVTRKIIGSATAFSAADAFGGLYRLAELRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPNSEL
GTYTNFVNLLDLCALAVPSRFRADGFPSGVTLIAPAGRDDLLAALGERLHAASGVHLGASSTKVPASIEVSPSAVANEIE
LVVVGAHLSGMPLNHELISRGARFLRAIPTAPDYKLFALQGGPPFRPGLLRVAPGEGTPIATEVWAISAEGFGSFVAGIP
APLGIGTTRLADGTAPKGFIVEAEGLKGARDISSFGGWRAYIKSLAG
>Mature_606_residues
SAAELTTFPTIASLHTAYAAGASPAEIIAATYRQLEAVADPGIFITLRPEHDVLADAAALGQFDPDTKPLWGIPFAVKDN
IDVACLPTTAACPGFASTPSETAFAVQRLLDAGAVLIGKTNLDQFATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAV
AHGLVTFALGTDTAGSGRVPAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDPWSRP
HPAAAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSPLFEVADLLYSGPWVAERYQAI
RQVIETAPELLHPVTRKIIGSATAFSAADAFGGLYRLAELRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPNSELG
TYTNFVNLLDLCALAVPSRFRADGFPSGVTLIAPAGRDDLLAALGERLHAASGVHLGASSTKVPASIEVSPSAVANEIEL
VVVGAHLSGMPLNHELISRGARFLRAIPTAPDYKLFALQGGPPFRPGLLRVAPGEGTPIATEVWAISAEGFGSFVAGIPA
PLGIGTTRLADGTAPKGFIVEAEGLKGARDISSFGGWRAYIKSLAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=440, Percent_Identity=27.0454545454545, Blast_Score=102, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17543272, Length=432, Percent_Identity=28.9351851851852, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17537465, Length=437, Percent_Identity=25.1716247139588, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17556264, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319685, Length=556, Percent_Identity=43.8848920863309, Blast_Score=389, Evalue=1e-109,
Organism=Saccharomyces cerevisiae, GI6323950, Length=416, Percent_Identity=28.3653846153846, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24648113, Length=265, Percent_Identity=32.8301886792453, Blast_Score=90, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24652985, Length=474, Percent_Identity=25.5274261603376, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19922090, Length=474, Percent_Identity=25.5274261603376, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24652981, Length=474, Percent_Identity=25.5274261603376, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24652983, Length=474, Percent_Identity=25.5274261603376, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356731, Length=481, Percent_Identity=24.3243243243243, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 62866; Mature: 62735

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAELTTFPTIASLHTAYAAGASPAEIIAATYRQLEAVADPGIFITLRPEHDVLADAAA
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
LGQFDPDTKPLWGIPFAVKDNIDVACLPTTAACPGFASTPSETAFAVQRLLDAGAVLIGK
HCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEC
TNLDQFATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAVAHGLVTFALGTDTAGSGRV
CCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCC
PAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDPWSR
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PHPAAAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSP
CCCCCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LFEVADLLYSGPWVAERYQAIRQVIETAPELLHPVTRKIIGSATAFSAADAFGGLYRLAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPNSELGTYTNFVNLLDLCALAVPSR
HHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
FRADGFPSGVTLIAPAGRDDLLAALGERLHAASGVHLGASSTKVPASIEVSPSAVANEIE
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECHHHHCCCEE
LVVVGAHLSGMPLNHELISRGARFLRAIPTAPDYKLFALQGGPPFRPGLLRVAPGEGTPI
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCC
ATEVWAISAEGFGSFVAGIPAPLGIGTTRLADGTAPKGFIVEAEGLKGARDISSFGGWRA
EEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCHHHH
YIKSLAG
HHHHHCC
>Mature Secondary Structure 
SAAELTTFPTIASLHTAYAAGASPAEIIAATYRQLEAVADPGIFITLRPEHDVLADAAA
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
LGQFDPDTKPLWGIPFAVKDNIDVACLPTTAACPGFASTPSETAFAVQRLLDAGAVLIGK
HCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEC
TNLDQFATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAVAHGLVTFALGTDTAGSGRV
CCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCC
PAALNNIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDPWSR
CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PHPAAAANPPALPPGLRVGVPDTVSRKFAGDLQSERAFDLAVADLATVVPAPARAVDLSP
CCCCCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LFEVADLLYSGPWVAERYQAIRQVIETAPELLHPVTRKIIGSATAFSAADAFGGLYRLAE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRRAADAIWSGIDVLIVPTYPRPRMVAELEADPIGPNSELGTYTNFVNLLDLCALAVPSR
HHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
FRADGFPSGVTLIAPAGRDDLLAALGERLHAASGVHLGASSTKVPASIEVSPSAVANEIE
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECHHHHCCCEE
LVVVGAHLSGMPLNHELISRGARFLRAIPTAPDYKLFALQGGPPFRPGLLRVAPGEGTPI
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCC
ATEVWAISAEGFGSFVAGIPAPLGIGTTRLADGTAPKGFIVEAEGLKGARDISSFGGWRA
EEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCHHHH
YIKSLAG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9809753 [H]