| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yeeE [C]
Identifier: 192289981
GI number: 192289981
Start: 1687532
End: 1688731
Strand: Reverse
Name: yeeE [C]
Synonym: Rpal_1579
Alternate gene names: 192289981
Gene position: 1688731-1687532 (Counterclockwise)
Preceding gene: 192289986
Following gene: 192289980
Centisome position: 29.4
GC content: 65.67
Gene sequence:
>1200_bases GTGTTTGGGCTTCTCATCTCATTTCGGGCGCACGTCCAGTGGCCTGTCGTCGGCTTCGCAGTTGTGCTGGCGCTCGCTGG AGGCGCAGTCGTGGCGCAAGACTGGCGCAGCGTCGCGCTGTGGGGCGTCGGCATCGCACTCGGATACGCGCTGTATCGCT CGACGTTCGGATTCAGTGCCGGGTTTCGTGCGCTATTGCGCGACGGCCGAACCGCACATGTTCGTGCGCAATGCCTGATG CTCGCCGCGGCTGCCGTGACCTTTCTGCCCGCGCTGGACGCCGGAGCGGTGTTCGGCCAGCCGGTGCGCGGATTCGTCTT TCCCGCCGGGATTGCATTGGCCGCAGGCGCCTTTGCGTTCGGGATCGGAATGCAGCTTGGCGGGGGCTGCGCATCCGGCA CGCTGTACACGGTCGGAGGCGGCTCAACTCGGATGCTGGTCACATTGCTGTTCATCGTCGTTGGCGCAACACTCGCCGCG CAGCACGCAGAATTATGGACAGATCTGCCGACGTTGCCCGGCGTATCGCTGCTCGCCATGCTGGGCTTGCTGCCTGTCCT CGCCCTGTACGCGGCGGTGTTCTTACTGTTGTGGCGCATCGCGCTTCTGCACGAGCGACGCCGACATGGGGAAGCGGCTT CGATCTGGCGAACGCAACCGCAGCAGCCATCGCCGTTCGCCTGGGCAGCGCTCGCGCTCGCAATGCTGAACTTCGCGACG CTGCTAGTCGCCGGACGTCCCTGGGGAATTACCCAAGCCTTCGCGCTGTGGGGTTCGAAGATCGCGGACGCCACTGGGCG CGCCGATCCGGTGTTCTGGACATTCTGGGAAAATCCAACCCGTGCCGAAGCGCTGCATCGTCCGCTCTCGGCCGACATCA CGTCGATCATGGACGTCGGCGTCATCGTCGGCGCGCTGCTGGCTGCGGGACTTGCAGGCCGTTTTTCTCCGCAATGGCGG ATCGCGCCGCTGCATCTGATCGCCTCGGTGGTCGGAGGCCTGCTGCTCGGCGCCGGTGCCATCGTCGCGACCGGCTGCAA CATCAGCGCGATGTTTTCCGGCATCGCGTCGGGAAGTCTGCACGGCTGGCTGTGGATCGCGGCCGCACTGCCCGGCAATT GGCTCGGCGTCCATCTGCGCCCGCTGTTCGGGCTCGACGACACGCCGGTTCAGCGCCGCATTCTCCGACAATCAGTTTGA
Upstream 100 bases:
>100_bases AAGTGATTGCTGCTTATTTTGCGAGTCCGACTTCCACCGGCTTGAGATTCCTGCCGTCTGCGGTTTCGATACGATGAATT CCATGAGCTCTGTTTGAAAA
Downstream 100 bases:
>100_bases CTCACCACGGGGGGCTTCATGTCAGTCACACGTTCATCGGTTGTTTCATTAGTTCTTGCCGCCGCCACGCTGGCGGTGGC AGCCACTCCCTCACTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; YeeE/YedE; LB Periplamsic Protein
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MFGLLISFRAHVQWPVVGFAVVLALAGGAVVAQDWRSVALWGVGIALGYALYRSTFGFSAGFRALLRDGRTAHVRAQCLM LAAAAVTFLPALDAGAVFGQPVRGFVFPAGIALAAGAFAFGIGMQLGGGCASGTLYTVGGGSTRMLVTLLFIVVGATLAA QHAELWTDLPTLPGVSLLAMLGLLPVLALYAAVFLLLWRIALLHERRRHGEAASIWRTQPQQPSPFAWAALALAMLNFAT LLVAGRPWGITQAFALWGSKIADATGRADPVFWTFWENPTRAEALHRPLSADITSIMDVGVIVGALLAAGLAGRFSPQWR IAPLHLIASVVGGLLLGAGAIVATGCNISAMFSGIASGSLHGWLWIAAALPGNWLGVHLRPLFGLDDTPVQRRILRQSV
Sequences:
>Translated_399_residues MFGLLISFRAHVQWPVVGFAVVLALAGGAVVAQDWRSVALWGVGIALGYALYRSTFGFSAGFRALLRDGRTAHVRAQCLM LAAAAVTFLPALDAGAVFGQPVRGFVFPAGIALAAGAFAFGIGMQLGGGCASGTLYTVGGGSTRMLVTLLFIVVGATLAA QHAELWTDLPTLPGVSLLAMLGLLPVLALYAAVFLLLWRIALLHERRRHGEAASIWRTQPQQPSPFAWAALALAMLNFAT LLVAGRPWGITQAFALWGSKIADATGRADPVFWTFWENPTRAEALHRPLSADITSIMDVGVIVGALLAAGLAGRFSPQWR IAPLHLIASVVGGLLLGAGAIVATGCNISAMFSGIASGSLHGWLWIAAALPGNWLGVHLRPLFGLDDTPVQRRILRQSV >Mature_399_residues MFGLLISFRAHVQWPVVGFAVVLALAGGAVVAQDWRSVALWGVGIALGYALYRSTFGFSAGFRALLRDGRTAHVRAQCLM LAAAAVTFLPALDAGAVFGQPVRGFVFPAGIALAAGAFAFGIGMQLGGGCASGTLYTVGGGSTRMLVTLLFIVVGATLAA QHAELWTDLPTLPGVSLLAMLGLLPVLALYAAVFLLLWRIALLHERRRHGEAASIWRTQPQQPSPFAWAALALAMLNFAT LLVAGRPWGITQAFALWGSKIADATGRADPVFWTFWENPTRAEALHRPLSADITSIMDVGVIVGALLAAGLAGRFSPQWR IAPLHLIASVVGGLLLGAGAIVATGCNISAMFSGIASGSLHGWLWIAAALPGNWLGVHLRPLFGLDDTPVQRRILRQSV
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41954; Mature: 41954
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLLISFRAHVQWPVVGFAVVLALAGGAVVAQDWRSVALWGVGIALGYALYRSTFGFSA CCCEEEEHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GFRALLRDGRTAHVRAQCLMLAAAAVTFLPALDAGAVFGQPVRGFVFPAGIALAAGAFAF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GIGMQLGGGCASGTLYTVGGGSTRMLVTLLFIVVGATLAAQHAELWTDLPTLPGVSLLAM HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LGLLPVLALYAAVFLLLWRIALLHERRRHGEAASIWRTQPQQPSPFAWAALALAMLNFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LLVAGRPWGITQAFALWGSKIADATGRADPVFWTFWENPTRAEALHRPLSADITSIMDVG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHH VIVGALLAAGLAGRFSPQWRIAPLHLIASVVGGLLLGAGAIVATGCNISAMFSGIASGSL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHCCCC HGWLWIAAALPGNWLGVHLRPLFGLDDTPVQRRILRQSV HHHEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure MFGLLISFRAHVQWPVVGFAVVLALAGGAVVAQDWRSVALWGVGIALGYALYRSTFGFSA CCCEEEEHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GFRALLRDGRTAHVRAQCLMLAAAAVTFLPALDAGAVFGQPVRGFVFPAGIALAAGAFAF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GIGMQLGGGCASGTLYTVGGGSTRMLVTLLFIVVGATLAAQHAELWTDLPTLPGVSLLAM HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LGLLPVLALYAAVFLLLWRIALLHERRRHGEAASIWRTQPQQPSPFAWAALALAMLNFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LLVAGRPWGITQAFALWGSKIADATGRADPVFWTFWENPTRAEALHRPLSADITSIMDVG HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHH VIVGALLAAGLAGRFSPQWRIAPLHLIASVVGGLLLGAGAIVATGCNISAMFSGIASGSL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHCCCC HGWLWIAAALPGNWLGVHLRPLFGLDDTPVQRRILRQSV HHHEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA