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The map label for this gene is 192289980

Identifier: 192289980

GI number: 192289980

Start: 1687172

End: 1687513

Strand: Reverse

Name: 192289980

Synonym: Rpal_1578

Alternate gene names: NA

Gene position: 1687513-1687172 (Counterclockwise)

Preceding gene: 192289981

Following gene: 192289979

Centisome position: 29.38

GC content: 62.87

Gene sequence:

>342_bases
ATGTCAGTCACACGTTCATCGGTTGTTTCATTAGTTCTTGCCGCCGCCACGCTGGCGGTGGCAGCCACTCCCTCACTCGC
AGAGGTGCACAAAAAGAAAAAGACCGCTCTCCCGCCGCCACTGATCGTGCAGGCCTGCTCGGGCTGCCACGGCCAGTTCG
GCAAGGGCCAGGGCGGAACGCCCGAACTCGCCGGCTACAAACGCGACTCCTTCGTTCTGGTCTGGGACGAGTTTCGCAAC
AACCAGCGGCCAGCCGCGACCATCATGCCGCGCATCGCGCGCGGCTACTCCGAAGCCGAGGTCGCCACTTTGGCCGACTA
TTTCTCATCCTTGCCGCGCTGA

Upstream 100 bases:

>100_bases
TTGGCTCGGCGTCCATCTGCGCCCGCTGTTCGGGCTCGACGACACGCCGGTTCAGCGCCGCATTCTCCGACAATCAGTTT
GACTCACCACGGGGGGCTTC

Downstream 100 bases:

>100_bases
AGAGGACATCATGACCAGCATCTCCCGCCGCTCCTTCGGCAAACTGGCCGCTGCCGGCCTCGCCACCCTCGCGGCTCCCT
CGTTGCTCCACGCCAAGGAT

Product: cytochrome C, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSVTRSSVVSLVLAAATLAVAATPSLAEVHKKKKTALPPPLIVQACSGCHGQFGKGQGGTPELAGYKRDSFVLVWDEFRN
NQRPAATIMPRIARGYSEAEVATLADYFSSLPR

Sequences:

>Translated_113_residues
MSVTRSSVVSLVLAAATLAVAATPSLAEVHKKKKTALPPPLIVQACSGCHGQFGKGQGGTPELAGYKRDSFVLVWDEFRN
NQRPAATIMPRIARGYSEAEVATLADYFSSLPR
>Mature_112_residues
SVTRSSVVSLVLAAATLAVAATPSLAEVHKKKKTALPPPLIVQACSGCHGQFGKGQGGTPELAGYKRDSFVLVWDEFRNN
QRPAATIMPRIARGYSEAEVATLADYFSSLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12031; Mature: 11900

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTRSSVVSLVLAAATLAVAATPSLAEVHKKKKTALPPPLIVQACSGCHGQFGKGQGGT
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
PELAGYKRDSFVLVWDEFRNNQRPAATIMPRIARGYSEAEVATLADYFSSLPR
CCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVTRSSVVSLVLAAATLAVAATPSLAEVHKKKKTALPPPLIVQACSGCHGQFGKGQGGT
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC
PELAGYKRDSFVLVWDEFRNNQRPAATIMPRIARGYSEAEVATLADYFSSLPR
CCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA