| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289894
Identifier: 192289894
GI number: 192289894
Start: 1565380
End: 1565670
Strand: Reverse
Name: 192289894
Synonym: Rpal_1485
Alternate gene names: NA
Gene position: 1565670-1565380 (Counterclockwise)
Preceding gene: 192289896
Following gene: 192289893
Centisome position: 27.26
GC content: 58.08
Gene sequence:
>291_bases ATGAGAATTCGGAACGTCCTGCACAAGGGGCTCCGACGGCTCATCGAGGATGATGACGCCGGCGGGATTCAAGCGGCCAT CGCGGACAAGCTTCGCCGCATGATTTCGTTTCTGCAGGACATGGAGCGGGAGGACGAACTCCGAACAATCCCGAGCTGGA AGGCGCACAGGCTGACCGGGGATCGCAAGGGGACATGGAGTCTGTTCGTCACCAAGAACTGGCGGCTGACCTTCCAGATC GACAAGGATGGGATCGAGATCATCGATCTCGACTACGAGGACTACCATTAG
Upstream 100 bases:
>100_bases GGATCAGCCGACGACTTAGTCTGGCGGCCGGTTGCGAGACGCCACGGACATGTAAAGCGTCGCTTTACAGACGACAGATT TATCCTATATCGTGCTTTCC
Downstream 100 bases:
>100_bases GACGCTTTGATGAGACCGACGATGCGGACAAAGACCGACCTGCGCATGAAAAGCCCGGCACACCCCGGCAGCTTCGTGAA ACACGAGATCATCGAACCGC
Product: plasmid maintenance system killer
Products: NA
Alternate protein names: Plasmid Maintenance System Killer Protein; Proteic Killer Suppression Protein
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MRIRNVLHKGLRRLIEDDDAGGIQAAIADKLRRMISFLQDMEREDELRTIPSWKAHRLTGDRKGTWSLFVTKNWRLTFQI DKDGIEIIDLDYEDYH
Sequences:
>Translated_96_residues MRIRNVLHKGLRRLIEDDDAGGIQAAIADKLRRMISFLQDMEREDELRTIPSWKAHRLTGDRKGTWSLFVTKNWRLTFQI DKDGIEIIDLDYEDYH >Mature_96_residues MRIRNVLHKGLRRLIEDDDAGGIQAAIADKLRRMISFLQDMEREDELRTIPSWKAHRLTGDRKGTWSLFVTKNWRLTFQI DKDGIEIIDLDYEDYH
Specific function: Unknown
COG id: COG3549
COG function: function code R; Plasmid maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11428; Mature: 11428
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRNVLHKGLRRLIEDDDAGGIQAAIADKLRRMISFLQDMEREDELRTIPSWKAHRLTG CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC DRKGTWSLFVTKNWRLTFQIDKDGIEIIDLDYEDYH CCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure MRIRNVLHKGLRRLIEDDDAGGIQAAIADKLRRMISFLQDMEREDELRTIPSWKAHRLTG CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC DRKGTWSLFVTKNWRLTFQIDKDGIEIIDLDYEDYH CCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA