| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289887
Identifier: 192289887
GI number: 192289887
Start: 1557848
End: 1558645
Strand: Reverse
Name: 192289887
Synonym: Rpal_1477
Alternate gene names: NA
Gene position: 1558645-1557848 (Counterclockwise)
Preceding gene: 192289889
Following gene: 192289885
Centisome position: 27.13
GC content: 67.04
Gene sequence:
>798_bases ATGGACGGCGTGCGCGATAATTTCCTCAGCCTCGATGCCGGAGAACCTCCGGTGATCGAGCGCAATCAGAACGGACAGTC GCCGTTCCTGCTGGTGTGCGACCATTACGGCCGCCAGATTCCGGCGCAGCTCGGCGACCTCGGCCTGCCCGAAGCCGAAC TGACGCGTCACATCGCCTGGGACGTCGGCATCGCCGGTGTCGCCGAGCGGGTGTCCGATGCGCTCGGCGCGCATCTGATC GCGCAGCGCTATTCGCGGCTGGTGATCGACTGCAACCGGCCGCCGAGCGCCGAGAGTTCGATCCCGCTGGTCAGCGAAGC GACCACGATCCCCGGCAATGACGGGCTGTCTCGCGAGCACGCCGCGGAGCGGCGGCGGCTGATCTTCGATCCGTATCACC AGCGGATCGAGGCCGCGATCGAGGACCGACAATTGTCCGGCCAGCCGACCGTGCTGCTGGCGCTGCATTCGTTCACGTCG GTGTATCACGGCATGGCGCGGCCCTGGCACATCGGCACGCTGTATCAGGACTGCACCGTGCTGCCGCCACTGCTGCTCGC CGAGCTGCGCCGCGAGCCGGATCTGGTGGTCGGCGACAATCAGCCCTATGCGGTCTCGGACGGCACCGACTACACCATTC CGGTGCACGGCACCGCACGCGGCCTGATCACCTCGGGCATCGAAATCCGCCAGGATCAGATCACCGACGAGGCCGGCCAG GTCGAATGGGCCAGCCGGCTCACCCGCGTGCTGAGCACGATCGCCGATACATTCCGGCAACAGCAGGCGCTGCGATAG
Upstream 100 bases:
>100_bases GTTCGTGCCGGCGAAGTTCAATCGTCTCGACGCCGCGCCGGCGAATCCGCTACCGATTCGGCGGGGCTCGGACGGCACAG ATCGATAGGCAGGTTCGGTG
Downstream 100 bases:
>100_bases CACGCCATCCCAAACCTCTCTGCGTCAATGCGAGCAGAAGGCAAAGCAATCCAGATACGCCGAGCACTCGGTAGCTGGCT TGCTTCGTCGGCTTCGCCTC
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAWDVGIAGVAERVSDALGAHLI AQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREHAAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTS VYHGMARPWHIGTLYQDCTVLPPLLLAELRREPDLVVGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQ VEWASRLTRVLSTIADTFRQQQALR
Sequences:
>Translated_265_residues MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAWDVGIAGVAERVSDALGAHLI AQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREHAAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTS VYHGMARPWHIGTLYQDCTVLPPLLLAELRREPDLVVGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQ VEWASRLTRVLSTIADTFRQQQALR >Mature_265_residues MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAWDVGIAGVAERVSDALGAHLI AQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREHAAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTS VYHGMARPWHIGTLYQDCTVLPPLLLAELRREPDLVVGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQ VEWASRLTRVLSTIADTFRQQQALR
Specific function: Unknown
COG id: COG3931
COG function: function code E; Predicted N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29252; Mature: 29252
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAW CCCCCCCCEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHH DVGIAGVAERVSDALGAHLIAQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREH HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTSVYHGMARPWHIGTLYQDCTV HHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEECHHHHHHHHH LPPLLLAELRREPDLVVGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQ CHHHHHHHHCCCCCEEEECCCCEEECCCCCEEEECCCCCCHHHHCCCHHHHHHHCCCCCC VEWASRLTRVLSTIADTFRQQQALR HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDGVRDNFLSLDAGEPPVIERNQNGQSPFLLVCDHYGRQIPAQLGDLGLPEAELTRHIAW CCCCCCCCEECCCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHH DVGIAGVAERVSDALGAHLIAQRYSRLVIDCNRPPSAESSIPLVSEATTIPGNDGLSREH HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAERRRLIFDPYHQRIEAAIEDRQLSGQPTVLLALHSFTSVYHGMARPWHIGTLYQDCTV HHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCEECHHHHHHHHH LPPLLLAELRREPDLVVGDNQPYAVSDGTDYTIPVHGTARGLITSGIEIRQDQITDEAGQ CHHHHHHHHCCCCCEEEECCCCEEECCCCCEEEECCCCCCHHHHCCCHHHHHHHCCCCCC VEWASRLTRVLSTIADTFRQQQALR HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA