Click here to switch to the map view.

The map label for this gene is 192289824

Identifier: 192289824

GI number: 192289824

Start: 1493540

End: 1494331

Strand: Reverse

Name: 192289824

Synonym: Rpal_1414

Alternate gene names: NA

Gene position: 1494331-1493540 (Counterclockwise)

Preceding gene: 192289825

Following gene: 192289822

Centisome position: 26.02

GC content: 65.4

Gene sequence:

>792_bases
ATGCAGCCAGATCCCCACCCTCTCGTCGAGGCGGCGACCAGCACCTCGCGCTTCGCAGTGACGCGGCGCTGGCTGGCGCG
GGTCTCCGAATGGTCGGCCAAGGCGACATTCCGGATCAAGCGCGGCACCCCGGCGGTGACGATCGCCGAACTCGGCAAGA
GCTGGGAACTGACCGACGCCCAGCGCGACTCCCTGCTGCAGCTCGGCGAGACCAAGCCGGGCGCGGCGTTCATCGACGAG
AAGGTCGGCAACATCAACCGCGCCGCGTTCCACCGCTCGGCCTTCGTGCTGAACGCGGCGACGCATCTGATCTTCGTCGA
CCTCGCCGCGCAGCTGTTGCTGTCGGTGTGGGAATTGAAGGCGGTGCTGATCGCGCTCAACCTGTTGCTGGCGCTGATCG
CGCATTTCCAGATGCGGGAGAATTATCGCGCTCTGATCGCCGGGCCACGGCAGTTGCCGAAGAAACGCCGGCTGCTCGGG
CTGCTGCGCAACCCGCGCTACAACAAGGCGGTGAAGAAAAGTTCGCGCCCCTACGCGCGCAGCGCCTGGAAAGAACAGAC
GCTGTACCGCACCGCGTATTTCGCCAACGCGGTGATCATCTTCCTCGGCTCGCAGTTCATCCTGCCGGCGGAGCGGCTGA
TCTTCCCGTTCGGATTCATGATCGGCAAGATCACCGGACTGATCACCACCATCGTGGTGTTTTTCGACGGCTGGCGCGGC
ATCCGCGCCGGCGACGACGCCCGCCTCGCGCGCGAGCGCGAGGTCTCGGTGTATCGCAACCTCAAGATCTGA

Upstream 100 bases:

>100_bases
ATCCGACAACAGATGAAGGCAGCCGCCAAGGCAGCCGCCAAGCTTGCAGAGGATCCGCTTTTCGGCGATTGACGGCGATC
GAGCCGCGCTGAAGGACACG

Downstream 100 bases:

>100_bases
GGGCGGGAACGAACCTCGCTGTCGATGAGCGTGAAATCAGTAACGGCCCATCAATGATGCGCCGCTTCGGTCTTGCCCCA
GGTCAGGAACAGACCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQPDPHPLVEAATSTSRFAVTRRWLARVSEWSAKATFRIKRGTPAVTIAELGKSWELTDAQRDSLLQLGETKPGAAFIDE
KVGNINRAAFHRSAFVLNAATHLIFVDLAAQLLLSVWELKAVLIALNLLLALIAHFQMRENYRALIAGPRQLPKKRRLLG
LLRNPRYNKAVKKSSRPYARSAWKEQTLYRTAYFANAVIIFLGSQFILPAERLIFPFGFMIGKITGLITTIVVFFDGWRG
IRAGDDARLAREREVSVYRNLKI

Sequences:

>Translated_263_residues
MQPDPHPLVEAATSTSRFAVTRRWLARVSEWSAKATFRIKRGTPAVTIAELGKSWELTDAQRDSLLQLGETKPGAAFIDE
KVGNINRAAFHRSAFVLNAATHLIFVDLAAQLLLSVWELKAVLIALNLLLALIAHFQMRENYRALIAGPRQLPKKRRLLG
LLRNPRYNKAVKKSSRPYARSAWKEQTLYRTAYFANAVIIFLGSQFILPAERLIFPFGFMIGKITGLITTIVVFFDGWRG
IRAGDDARLAREREVSVYRNLKI
>Mature_263_residues
MQPDPHPLVEAATSTSRFAVTRRWLARVSEWSAKATFRIKRGTPAVTIAELGKSWELTDAQRDSLLQLGETKPGAAFIDE
KVGNINRAAFHRSAFVLNAATHLIFVDLAAQLLLSVWELKAVLIALNLLLALIAHFQMRENYRALIAGPRQLPKKRRLLG
LLRNPRYNKAVKKSSRPYARSAWKEQTLYRTAYFANAVIIFLGSQFILPAERLIFPFGFMIGKITGLITTIVVFFDGWRG
IRAGDDARLAREREVSVYRNLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29731; Mature: 29731

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDPHPLVEAATSTSRFAVTRRWLARVSEWSAKATFRIKRGTPAVTIAELGKSWELTDA
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHCCCCCCCCHH
QRDSLLQLGETKPGAAFIDEKVGNINRAAFHRSAFVLNAATHLIFVDLAAQLLLSVWELK
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLIALNLLLALIAHFQMRENYRALIAGPRQLPKKRRLLGLLRNPRYNKAVKKSSRPYAR
HHHHHHHHHHHHHHHHHHHHCCHHEECCCHHCHHHHHHHHHHCCCCHHHHHHHCCCCHHH
SAWKEQTLYRTAYFANAVIIFLGSQFILPAERLIFPFGFMIGKITGLITTIVVFFDGWRG
HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IRAGDDARLAREREVSVYRNLKI
CCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQPDPHPLVEAATSTSRFAVTRRWLARVSEWSAKATFRIKRGTPAVTIAELGKSWELTDA
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHCCCCCCCCHH
QRDSLLQLGETKPGAAFIDEKVGNINRAAFHRSAFVLNAATHLIFVDLAAQLLLSVWELK
HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLIALNLLLALIAHFQMRENYRALIAGPRQLPKKRRLLGLLRNPRYNKAVKKSSRPYAR
HHHHHHHHHHHHHHHHHHHHCCHHEECCCHHCHHHHHHHHHHCCCCHHHHHHHCCCCHHH
SAWKEQTLYRTAYFANAVIIFLGSQFILPAERLIFPFGFMIGKITGLITTIVVFFDGWRG
HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IRAGDDARLAREREVSVYRNLKI
CCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA