| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289825
Identifier: 192289825
GI number: 192289825
Start: 1494360
End: 1495292
Strand: Reverse
Name: 192289825
Synonym: Rpal_1415
Alternate gene names: NA
Gene position: 1495292-1494360 (Counterclockwise)
Preceding gene: 192289826
Following gene: 192289824
Centisome position: 26.03
GC content: 66.35
Gene sequence:
>933_bases ATGCGTCGAGTTCTCAAGAAGCGTACGGCCAAGCCGGGCACCGGCCCGGCCCACGATATCGTTCTGTCGCAAAATGCCGG CAGCGCCGAGGCATTCCGGGCGATTGCGACCGAATTGCTACGCCTGACCGCCGCGCAGCAACCGAAGGTGCGACGCCGCG ATCCGACCGGTGTGCACCAGATGCGGATCGCGCTGCGGCGCATGCGCGCAGCGATCTCGGTGTTCGGCGAGCTGATCGAA GGGCGCGACACCCAGCGGTTGAAGCGTGAGCTGAAGTGGCTCGCTGGACGGCTCGCCCCGGCGCGTGACCTTCATCTCCT GGAAGTCAAAATCAAGAGCGCGCAACTTGGAACCGGCTCACCGGCGTTCCTGAAGCGGCTCGGCTCCGACCGCGGCGCAG CCTTCGCCAGCGCCAGCGCCACCGTCGAGCTGCAGCGCTTCCGCAAGCTGATGAGCGACCTGCAACGCTGGATCGACGCC GGAGAGTGGACCAGGGGCGCAAACGACGCGGAACGCCCGTCGGCCGCTGAGTTCGGCCAGCAGGTGCTGGCCCGCCGCGC CCGCAAGCTCAACAAGCGCCTGGAGAAGCTGGAGCAGCTCGACGACGAGGAGCGGCATCAGGTCCGGATCGCCGCCAAGA AGCTGAACTACGCGATCGGCTTCTTCGAAAGCCTGTTCGACGGCAGGACCGGCAAGCGGCTGGAACGGTTCAGGAAGCAC CTGAAGAAGCTGCTCGACGCGCTTGGCGCCCTCAACGACGTCGCGGTGCACCGCAAACTCGCCGGCAAATTCAGCCGCCG GGCCACGGCGAAGCTCGATCCCGACGCCGCCCGGCAGCTCGCCGACCTTGATGATGTCGAGATCCGACAACAGATGAAGG CAGCCGCCAAGGCAGCCGCCAAGCTTGCAGAGGATCCGCTTTTCGGCGATTGA
Upstream 100 bases:
>100_bases GTTGCGGTGCGTGTGGGGCGACTGCGCGACGCGGCGTCATCGGCGCGTAAATCTGCTAGGATACCGCGGGCGGTCATCTT CTTCGTCCGCGTGGGACAAT
Downstream 100 bases:
>100_bases CGGCGATCGAGCCGCGCTGAAGGACACGATGCAGCCAGATCCCCACCCTCTCGTCGAGGCGGCGACCAGCACCTCGCGCT TCGCAGTGACGCGGCGCTGG
Product: CHAD domain containing protein
Products: NA
Alternate protein names: CHAD Domain Containing Protein; Adenylate Cyclase; Ceramide Glucosyltransferase; Adenylate Cyclase Family Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MRRVLKKRTAKPGTGPAHDIVLSQNAGSAEAFRAIATELLRLTAAQQPKVRRRDPTGVHQMRIALRRMRAAISVFGELIE GRDTQRLKRELKWLAGRLAPARDLHLLEVKIKSAQLGTGSPAFLKRLGSDRGAAFASASATVELQRFRKLMSDLQRWIDA GEWTRGANDAERPSAAEFGQQVLARRARKLNKRLEKLEQLDDEERHQVRIAAKKLNYAIGFFESLFDGRTGKRLERFRKH LKKLLDALGALNDVAVHRKLAGKFSRRATAKLDPDAARQLADLDDVEIRQQMKAAAKAAAKLAEDPLFGD
Sequences:
>Translated_310_residues MRRVLKKRTAKPGTGPAHDIVLSQNAGSAEAFRAIATELLRLTAAQQPKVRRRDPTGVHQMRIALRRMRAAISVFGELIE GRDTQRLKRELKWLAGRLAPARDLHLLEVKIKSAQLGTGSPAFLKRLGSDRGAAFASASATVELQRFRKLMSDLQRWIDA GEWTRGANDAERPSAAEFGQQVLARRARKLNKRLEKLEQLDDEERHQVRIAAKKLNYAIGFFESLFDGRTGKRLERFRKH LKKLLDALGALNDVAVHRKLAGKFSRRATAKLDPDAARQLADLDDVEIRQQMKAAAKAAAKLAEDPLFGD >Mature_310_residues MRRVLKKRTAKPGTGPAHDIVLSQNAGSAEAFRAIATELLRLTAAQQPKVRRRDPTGVHQMRIALRRMRAAISVFGELIE GRDTQRLKRELKWLAGRLAPARDLHLLEVKIKSAQLGTGSPAFLKRLGSDRGAAFASASATVELQRFRKLMSDLQRWIDA GEWTRGANDAERPSAAEFGQQVLARRARKLNKRLEKLEQLDDEERHQVRIAAKKLNYAIGFFESLFDGRTGKRLERFRKH LKKLLDALGALNDVAVHRKLAGKFSRRATAKLDPDAARQLADLDDVEIRQQMKAAAKAAAKLAEDPLFGD
Specific function: Unknown
COG id: COG3025
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34718; Mature: 34718
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLKKRTAKPGTGPAHDIVLSQNAGSAEAFRAIATELLRLTAAQQPKVRRRDPTGVHQ CCHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH MRIALRRMRAAISVFGELIEGRDTQRLKRELKWLAGRLAPARDLHLLEVKIKSAQLGTGS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCC PAFLKRLGSDRGAAFASASATVELQRFRKLMSDLQRWIDAGEWTRGANDAERPSAAEFGQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QVLARRARKLNKRLEKLEQLDDEERHQVRIAAKKLNYAIGFFESLFDGRTGKRLERFRKH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LKKLLDALGALNDVAVHRKLAGKFSRRATAKLDPDAARQLADLDDVEIRQQMKAAAKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH KLAEDPLFGD HHHCCCCCCC >Mature Secondary Structure MRRVLKKRTAKPGTGPAHDIVLSQNAGSAEAFRAIATELLRLTAAQQPKVRRRDPTGVHQ CCHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH MRIALRRMRAAISVFGELIEGRDTQRLKRELKWLAGRLAPARDLHLLEVKIKSAQLGTGS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCC PAFLKRLGSDRGAAFASASATVELQRFRKLMSDLQRWIDAGEWTRGANDAERPSAAEFGQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QVLARRARKLNKRLEKLEQLDDEERHQVRIAAKKLNYAIGFFESLFDGRTGKRLERFRKH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LKKLLDALGALNDVAVHRKLAGKFSRRATAKLDPDAARQLADLDDVEIRQQMKAAAKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH KLAEDPLFGD HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA