Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289812

Identifier: 192289812

GI number: 192289812

Start: 1477465

End: 1478844

Strand: Reverse

Name: 192289812

Synonym: Rpal_1402

Alternate gene names: NA

Gene position: 1478844-1477465 (Counterclockwise)

Preceding gene: 192289813

Following gene: 192289811

Centisome position: 25.75

GC content: 68.77

Gene sequence:

>1380_bases
ATGCCTGAAGCCAGCGCGCTGTATTGTCACCGCGGCACGCGTGCGATCCAGCGCATGGTGGAGTTTGCGCCCTCGACCGG
AGGGCTGGCGCTGTGGGTGCAGCACCGCGACCTTGCCGCCGATGCACCGGCAGACGTCCCGGCCGCCGGCACCGACGGCA
CCACGGTGTACTACAGCGCCGCATTCGAACGGTTGCCGCTGCCCGAACAGGTCGGCGTCGTCGCGCACGAAGTGCTGCAC
ATCGCGCTACGCCACTCCCAGCGTTTCGTCGAGCTGCAACGTACGCAGGGCGATGTCGATCTCGAACTGTTCAACATCTG
CGCCGACGCCATCGTCAACTCGACGCTGGCGCATCTGAGCTGGCTGCAACTGCCGGCGAACGCGGTGATGCTGGAGCAGA
TCGTCTTCCAGGCGCTCGGCCGCGAGCAGCAGCCCGAGGCGGCACTGTTGGAATGGGACGTTGAGAAGCTGTACCGCGCG
ATCGACGACCGCGACCGCGACGGCACCAGCGGCAAACAACAATCCGGCCGGCAGTCCCAGCAAGGCTCCGAAGCCGATGC
GTCCGGCTCCGGCGGAAAGGATCAGGCGCAGTCGCAATCCGGCGCCGGCGAGACCGAGACCGGGCGACCGAGCGACGGCA
CCAAATCCGCCAAGGTGCGGGCTCTCGGCGCCGGAGGCTCACGCGACCTGGTGCCAAATCCGGACTCGCAGTCGGCACCC
GAGCACGAGGCCGAACGCGCGCGCGAATGGAGCGAGCGAATCCTGCGCGGCCATGCCGGCGATGGCGCGTTCTCGATGCT
GCGCGCGTTGATCGCCGATCTGCCGCGGACCCGCACGCCGTGGGCCCAGGTGCTGCGGGTGCAGCTCGCGCGCGGCCTCG
CCCGCAAGCCGGCGCTGACGTGGTCGCGCCCGACCCGCTCCTACATCGCCAACCAGGGCCGCGCCGGCAATCATCGGATG
CCGTTCGAGCCGGGCTTCAGCCCCACCAAGAACGAGCCGCGGCTGGTGCTGATCATCGACGTCTCAGGCTCGATCGACGA
CGCGCTGGTGCAGCGCTTTGCCAACGAGATCGAAACCATCATCCGGCGCCAAGAAGCCGGCCTGGTGCTGATCATCGGCG
ACGAGCGGGTGCGGCAGGTCGAGGTCTTCGAGCCCGGCCGCCGCTTCGTGCTCAGCGAGATCGAATTCTCCGGCGGCGGC
GGCACCGACTTCACGCCGCTGCTCGCCGAGGCCGACCGGCACAAGCCCGACATCACCGTGGTCTTGACCGACCTCGAAGG
CCCGGCGCATTTCAAGCCGCGTTGGCCGGTGATCTGGGCGGTGCCACAAGAACACGCTCACGCGGTGCAGCCGTTCGGGC
GCCTGCTCGCGCTCGATTGA

Upstream 100 bases:

>100_bases
TTGCTGATGCAGCGCGGCCTGGAGAACGGCCTCGAATCCGCGATCCTCGATAGTCCGGCCTACGCCAGCTACGCCGGGCG
CCGGCAATTGGAAGCCTCCG

Downstream 100 bases:

>100_bases
CGAGGTCCGAAGCACGACCAAGAGAGGCTCAGGAGCACGCCATGCTTCAGGTGACCGGAATTCCGGATGCGTGCGACAAT
CTCGCGCCGATCCCAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MPEASALYCHRGTRAIQRMVEFAPSTGGLALWVQHRDLAADAPADVPAAGTDGTTVYYSAAFERLPLPEQVGVVAHEVLH
IALRHSQRFVELQRTQGDVDLELFNICADAIVNSTLAHLSWLQLPANAVMLEQIVFQALGREQQPEAALLEWDVEKLYRA
IDDRDRDGTSGKQQSGRQSQQGSEADASGSGGKDQAQSQSGAGETETGRPSDGTKSAKVRALGAGGSRDLVPNPDSQSAP
EHEAERAREWSERILRGHAGDGAFSMLRALIADLPRTRTPWAQVLRVQLARGLARKPALTWSRPTRSYIANQGRAGNHRM
PFEPGFSPTKNEPRLVLIIDVSGSIDDALVQRFANEIETIIRRQEAGLVLIIGDERVRQVEVFEPGRRFVLSEIEFSGGG
GTDFTPLLAEADRHKPDITVVLTDLEGPAHFKPRWPVIWAVPQEHAHAVQPFGRLLALD

Sequences:

>Translated_459_residues
MPEASALYCHRGTRAIQRMVEFAPSTGGLALWVQHRDLAADAPADVPAAGTDGTTVYYSAAFERLPLPEQVGVVAHEVLH
IALRHSQRFVELQRTQGDVDLELFNICADAIVNSTLAHLSWLQLPANAVMLEQIVFQALGREQQPEAALLEWDVEKLYRA
IDDRDRDGTSGKQQSGRQSQQGSEADASGSGGKDQAQSQSGAGETETGRPSDGTKSAKVRALGAGGSRDLVPNPDSQSAP
EHEAERAREWSERILRGHAGDGAFSMLRALIADLPRTRTPWAQVLRVQLARGLARKPALTWSRPTRSYIANQGRAGNHRM
PFEPGFSPTKNEPRLVLIIDVSGSIDDALVQRFANEIETIIRRQEAGLVLIIGDERVRQVEVFEPGRRFVLSEIEFSGGG
GTDFTPLLAEADRHKPDITVVLTDLEGPAHFKPRWPVIWAVPQEHAHAVQPFGRLLALD
>Mature_458_residues
PEASALYCHRGTRAIQRMVEFAPSTGGLALWVQHRDLAADAPADVPAAGTDGTTVYYSAAFERLPLPEQVGVVAHEVLHI
ALRHSQRFVELQRTQGDVDLELFNICADAIVNSTLAHLSWLQLPANAVMLEQIVFQALGREQQPEAALLEWDVEKLYRAI
DDRDRDGTSGKQQSGRQSQQGSEADASGSGGKDQAQSQSGAGETETGRPSDGTKSAKVRALGAGGSRDLVPNPDSQSAPE
HEAERAREWSERILRGHAGDGAFSMLRALIADLPRTRTPWAQVLRVQLARGLARKPALTWSRPTRSYIANQGRAGNHRMP
FEPGFSPTKNEPRLVLIIDVSGSIDDALVQRFANEIETIIRRQEAGLVLIIGDERVRQVEVFEPGRRFVLSEIEFSGGGG
TDFTPLLAEADRHKPDITVVLTDLEGPAHFKPRWPVIWAVPQEHAHAVQPFGRLLALD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50264; Mature: 50133

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEASALYCHRGTRAIQRMVEFAPSTGGLALWVQHRDLAADAPADVPAAGTDGTTVYYSA
CCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEH
AFERLPLPEQVGVVAHEVLHIALRHSQRFVELQRTQGDVDLELFNICADAIVNSTLAHLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WLQLPANAVMLEQIVFQALGREQQPEAALLEWDVEKLYRAIDDRDRDGTSGKQQSGRQSQ
HHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHH
QGSEADASGSGGKDQAQSQSGAGETETGRPSDGTKSAKVRALGAGGSRDLVPNPDSQSAP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
EHEAERAREWSERILRGHAGDGAFSMLRALIADLPRTRTPWAQVLRVQLARGLARKPALT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
WSRPTRSYIANQGRAGNHRMPFEPGFSPTKNEPRLVLIIDVSGSIDDALVQRFANEIETI
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
IRRQEAGLVLIIGDERVRQVEVFEPGRRFVLSEIEFSGGGGTDFTPLLAEADRHKPDITV
HHHHCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCEEE
VLTDLEGPAHFKPRWPVIWAVPQEHAHAVQPFGRLLALD
EEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEASALYCHRGTRAIQRMVEFAPSTGGLALWVQHRDLAADAPADVPAAGTDGTTVYYSA
CCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEH
AFERLPLPEQVGVVAHEVLHIALRHSQRFVELQRTQGDVDLELFNICADAIVNSTLAHLS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WLQLPANAVMLEQIVFQALGREQQPEAALLEWDVEKLYRAIDDRDRDGTSGKQQSGRQSQ
HHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHH
QGSEADASGSGGKDQAQSQSGAGETETGRPSDGTKSAKVRALGAGGSRDLVPNPDSQSAP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
EHEAERAREWSERILRGHAGDGAFSMLRALIADLPRTRTPWAQVLRVQLARGLARKPALT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
WSRPTRSYIANQGRAGNHRMPFEPGFSPTKNEPRLVLIIDVSGSIDDALVQRFANEIETI
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
IRRQEAGLVLIIGDERVRQVEVFEPGRRFVLSEIEFSGGGGTDFTPLLAEADRHKPDITV
HHHHCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCEEE
VLTDLEGPAHFKPRWPVIWAVPQEHAHAVQPFGRLLALD
EEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA