| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289783
Identifier: 192289783
GI number: 192289783
Start: 1446035
End: 1448098
Strand: Reverse
Name: 192289783
Synonym: Rpal_1373
Alternate gene names: NA
Gene position: 1448098-1446035 (Counterclockwise)
Preceding gene: 192289784
Following gene: 192289779
Centisome position: 25.21
GC content: 68.36
Gene sequence:
>2064_bases ATGCACTACGGCATCGCCTTTGCGCCTCTCGTCCCGACCGCCGTGCTGTGGGTCGCGATCGCTGCTGTTGCGGTGATCGC GCTGGTGCTGCTGCTCGGGCGGTCGCGCGGCGCCTGGGTGCGGATCGCAGCGCTGGCGCTGATCGTGCTGGCACTCGCCA ATCCGTCGTTCACCCGCGAGGAGCGCGAGCCACTGTCCTCGGTCGCCGCCGTGGTGGTCGACAAGAGCCCGAGCCAGAAT TTCGGCAAGCGCACCGAAGAAGCCGAACAGGCCAAGGAAGCGCTGGTCGACCGGCTGAAGCAGATCAAGGGCCTCGAGGT CCGCGTCGTCGAAGCCGGCCAGGCCGACGGAGAGACCGACGGTACCAAGCTGTTCGGCGCGGTGACGTCGGCGCTGTCCG ACGTGCCGACTGACCGCGTCGCCGGCGCGTTCCTGATCACCGATGGCCGTGTCCATGACATCCCGGCGAACGCGCAGGCG CTCGGCTTCCAGGCGCCGGTGCAGGCGCTGATTACCGGCCGCAAGGACGAGCGCGACCGCCGCATCGCAATCCTGGCGGC GCCGCGGTTCGGCATCGTCGGCCAGACCCAGACCATCACCTTCCGGCTCGACGACCAGGGCATCACCGGCGACCGCGCCC GCGTCGTGGTGCGGCGCGACGGCGAAGTGCTGAACCAGCGCACCGTGCTGAGCGGCCAGACTGTCAATGTCGATGTCGAG ATCAAGCACGCCGGCCAGAACATCGTCGAGATCGAAGCCTCGCCGGTGGAGAACGAGCTGACGCTGGTCAACAACCGCGC GGTGGTGTCGATCGACGGGGTGCGCGACAAGCTGCGGGTGCTGCTGGTGTCCGGCGAGCCGCATTCCGGCGAGCGCACCT GGCGCAACCTGCTGAAATCCGACGCCAGCGTCGATCTGGTACACTTCACCATTCTGCGGCCGCCGGAGAAACAGGACGGC ACGCCGATCAACGAATTGTCGCTGATCGCCTTCCCGACCCGCGAACTGTTCCAGCAGAAGATCAACGAGTTTCAACTCAT CATCTTCGACCGCTACGCCCGCCAGGGCGTGCTGCCGATGGCGTATTTCGACAACATCTCGCGCTACGTGAAGAATGGCG GCGCGGTGCTGGTCTCGGCAGGTCCGGACTACGCGTCGACCACCTCGATCTGGCGCACGCCGCTCGACACGCTGCTGCCG GCCGAACCGGTCGGCGTCACCGAGAAGCCGTATCACGCGCGGCTGTCGGACGCCGGCAAGCGCCATCCGGTGACGCGCGG GCTCGAAGGCTCGGCCTCCGAGCCGCCGCATTGGAGCCGGTTCTTCCGCACGGTCGACACCCGCAACGCGACCGCAGCGC CGCTGATGACCGGCGCCGACAACATGCCGCTGCTGCTGCTGTCGCATTTCGGCGAGGGCCGCGTCGCGCTGCTGCTCTCC GACCACATCTGGCTGTGGGCGCGCGGCTACGAGGGCGGCGGCCCGCATCTCGATTTGCTGCGGCGGATGTCGCACTGGCT GATGAAGCAGCCGGATCTCGATGAAGAAGCGCTGCGGCTGAAAGCCGAGGGCAAAAACCTCGAAGTGCTACGCCAGACCA TGGGCGAGAGCGTGCCGCCCGTCACCGTCACATCGCCGTCGGGCAAGACGCGCGAACTGACGCTGTCGGCCGGCGATCCC GGCACTTGGCGCGCGACGCTTCCGGCCGACGAGCTCGGATTGTGGTCGGCGACCGACGGCACGCTGAAGGCGCTGATCAA TGTCGGGCCGGTCAATCCGAAGGAATTCGCCGAAGTCACCTCGACCACCGAGACGCTGCGGCCACTCACTCAGGCGACTG GCGGCGATGCCCGGCGGATCGCCGAGAGCGGCAGCGTCGAGCTGCCGCGGATCGTGCCGGTGACCTCGGCGACGATGTTC CGCGGCGACGGCTGGCTCGGCGTGCGGATGCGCGACGCCAGCGTCGTCACCGGCGTCGGCGTGCTGCCGGTGTTCACCGG GCTGATCGGCTTGCTGCTGCTGCTCGGCGCCTTCGCGGCGACTTGGCTGCGCGAAGGCCGCTGA
Upstream 100 bases:
>100_bases CGCCGGGTGAGGGGTTTCGCCCTCTCAATAGGTCGTACCCCCTCACCCCAACCCTCTCCCCATGGGAGAGGGAGCAGGCA GCATCCGGAGCTAGCACCTG
Downstream 100 bases:
>100_bases TCACTCTTGAAAGGTGGAAGTCGAGCTGCGCCTACCAGCGCAGCTCGCGGGTCAGCGCCAGCGGCGGGTGGCCGAACAAT TCGTTCACCGCGGCGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MHYGIAFAPLVPTAVLWVAIAAVAVIALVLLLGRSRGAWVRIAALALIVLALANPSFTREEREPLSSVAAVVVDKSPSQN FGKRTEEAEQAKEALVDRLKQIKGLEVRVVEAGQADGETDGTKLFGAVTSALSDVPTDRVAGAFLITDGRVHDIPANAQA LGFQAPVQALITGRKDERDRRIAILAAPRFGIVGQTQTITFRLDDQGITGDRARVVVRRDGEVLNQRTVLSGQTVNVDVE IKHAGQNIVEIEASPVENELTLVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPMAYFDNISRYVKNGGAVLVSAGPDYASTTSIWRTPLDTLLP AEPVGVTEKPYHARLSDAGKRHPVTRGLEGSASEPPHWSRFFRTVDTRNATAAPLMTGADNMPLLLLSHFGEGRVALLLS DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLKAEGKNLEVLRQTMGESVPPVTVTSPSGKTRELTLSAGDP GTWRATLPADELGLWSATDGTLKALINVGPVNPKEFAEVTSTTETLRPLTQATGGDARRIAESGSVELPRIVPVTSATMF RGDGWLGVRMRDASVVTGVGVLPVFTGLIGLLLLLGAFAATWLREGR
Sequences:
>Translated_687_residues MHYGIAFAPLVPTAVLWVAIAAVAVIALVLLLGRSRGAWVRIAALALIVLALANPSFTREEREPLSSVAAVVVDKSPSQN FGKRTEEAEQAKEALVDRLKQIKGLEVRVVEAGQADGETDGTKLFGAVTSALSDVPTDRVAGAFLITDGRVHDIPANAQA LGFQAPVQALITGRKDERDRRIAILAAPRFGIVGQTQTITFRLDDQGITGDRARVVVRRDGEVLNQRTVLSGQTVNVDVE IKHAGQNIVEIEASPVENELTLVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPMAYFDNISRYVKNGGAVLVSAGPDYASTTSIWRTPLDTLLP AEPVGVTEKPYHARLSDAGKRHPVTRGLEGSASEPPHWSRFFRTVDTRNATAAPLMTGADNMPLLLLSHFGEGRVALLLS DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLKAEGKNLEVLRQTMGESVPPVTVTSPSGKTRELTLSAGDP GTWRATLPADELGLWSATDGTLKALINVGPVNPKEFAEVTSTTETLRPLTQATGGDARRIAESGSVELPRIVPVTSATMF RGDGWLGVRMRDASVVTGVGVLPVFTGLIGLLLLLGAFAATWLREGR >Mature_687_residues MHYGIAFAPLVPTAVLWVAIAAVAVIALVLLLGRSRGAWVRIAALALIVLALANPSFTREEREPLSSVAAVVVDKSPSQN FGKRTEEAEQAKEALVDRLKQIKGLEVRVVEAGQADGETDGTKLFGAVTSALSDVPTDRVAGAFLITDGRVHDIPANAQA LGFQAPVQALITGRKDERDRRIAILAAPRFGIVGQTQTITFRLDDQGITGDRARVVVRRDGEVLNQRTVLSGQTVNVDVE IKHAGQNIVEIEASPVENELTLVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKSDASVDLVHFTILRPPEKQDG TPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPMAYFDNISRYVKNGGAVLVSAGPDYASTTSIWRTPLDTLLP AEPVGVTEKPYHARLSDAGKRHPVTRGLEGSASEPPHWSRFFRTVDTRNATAAPLMTGADNMPLLLLSHFGEGRVALLLS DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLKAEGKNLEVLRQTMGESVPPVTVTSPSGKTRELTLSAGDP GTWRATLPADELGLWSATDGTLKALINVGPVNPKEFAEVTSTTETLRPLTQATGGDARRIAESGSVELPRIVPVTSATMF RGDGWLGVRMRDASVVTGVGVLPVFTGLIGLLLLLGAFAATWLREGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74545; Mature: 74545
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYGIAFAPLVPTAVLWVAIAAVAVIALVLLLGRSRGAWVRIAALALIVLALANPSFTRE CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH EREPLSSVAAVVVDKSPSQNFGKRTEEAEQAKEALVDRLKQIKGLEVRVVEAGQADGETD HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC GTKLFGAVTSALSDVPTDRVAGAFLITDGRVHDIPANAQALGFQAPVQALITGRKDERDR CHHHHHHHHHHHHCCCCHHHCCEEEEECCEEEECCCCCHHCCCHHHHHHHHCCCCCCCCC RIAILAAPRFGIVGQTQTITFRLDDQGITGDRARVVVRRDGEVLNQRTVLSGQTVNVDVE EEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHCCEEEECCCEEEEEEE IKHAGQNIVEIEASPVENELTLVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKS EEECCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC DASVDLVHFTILRPPEKQDGTPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPM CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEEEHHHHCCCCCH AYFDNISRYVKNGGAVLVSAGPDYASTTSIWRTPLDTLLPAEPVGVTEKPYHARLSDAGK HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCHHHCCCC RHPVTRGLEGSASEPPHWSRFFRTVDTRNATAAPLMTGADNMPLLLLSHFGEGRVALLLS CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEE DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLKAEGKNLEVLRQTMGESVPP CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCHHHHHHHHCCCCCC VTVTSPSGKTRELTLSAGDPGTWRATLPADELGLWSATDGTLKALINVGPVNPKEFAEVT EEEECCCCCCEEEEEECCCCCCEEEECCHHHCCCEECCCHHHEEEEECCCCCHHHHHHHH STTETLRPLTQATGGDARRIAESGSVELPRIVPVTSATMFRGDGWLGVRMRDASVVTGVG HHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCEEEEECCCEEEEEEECCHHHHCCC VLPVFTGLIGLLLLLGAFAATWLREGR HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHYGIAFAPLVPTAVLWVAIAAVAVIALVLLLGRSRGAWVRIAALALIVLALANPSFTRE CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH EREPLSSVAAVVVDKSPSQNFGKRTEEAEQAKEALVDRLKQIKGLEVRVVEAGQADGETD HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC GTKLFGAVTSALSDVPTDRVAGAFLITDGRVHDIPANAQALGFQAPVQALITGRKDERDR CHHHHHHHHHHHHCCCCHHHCCEEEEECCEEEECCCCCHHCCCHHHHHHHHCCCCCCCCC RIAILAAPRFGIVGQTQTITFRLDDQGITGDRARVVVRRDGEVLNQRTVLSGQTVNVDVE EEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHCCEEEECCCEEEEEEE IKHAGQNIVEIEASPVENELTLVNNRAVVSIDGVRDKLRVLLVSGEPHSGERTWRNLLKS EEECCCCEEEEECCCCCCCEEEEECCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC DASVDLVHFTILRPPEKQDGTPINELSLIAFPTRELFQQKINEFQLIIFDRYARQGVLPM CCCEEEEEEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHCCEEEEEEEHHHHCCCCCH AYFDNISRYVKNGGAVLVSAGPDYASTTSIWRTPLDTLLPAEPVGVTEKPYHARLSDAGK HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCHHHCCCC RHPVTRGLEGSASEPPHWSRFFRTVDTRNATAAPLMTGADNMPLLLLSHFGEGRVALLLS CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEE DHIWLWARGYEGGGPHLDLLRRMSHWLMKQPDLDEEALRLKAEGKNLEVLRQTMGESVPP CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCHHHHHHHHCCCCCC VTVTSPSGKTRELTLSAGDPGTWRATLPADELGLWSATDGTLKALINVGPVNPKEFAEVT EEEECCCCCCEEEEEECCCCCCEEEECCHHHCCCEECCCHHHEEEEECCCCCHHHHHHHH STTETLRPLTQATGGDARRIAESGSVELPRIVPVTSATMFRGDGWLGVRMRDASVVTGVG HHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCEEEEECCCEEEEEEECCHHHHCCC VLPVFTGLIGLLLLLGAFAATWLREGR HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA