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The map label for this gene is yfdH [C]

Identifier: 192289749

GI number: 192289749

Start: 1411207

End: 1412250

Strand: Reverse

Name: yfdH [C]

Synonym: Rpal_1339

Alternate gene names: 192289749

Gene position: 1412250-1411207 (Counterclockwise)

Preceding gene: 192289750

Following gene: 192289748

Centisome position: 24.59

GC content: 66.57

Gene sequence:

>1044_bases
ATGATGCTTGGGAGTGACGTCTCGGGTCTGTCCACCGAAGCGGGTACCGCCGCGGCACTGGGCCTGTCCATCGTGGTGCC
GGCCTACAACGAAGCCGGCGGCCTGCAGGCACTGCACGGCCGGCTGATCACGCTGGCCGCAACGCTACGCCAGCGCTACG
GCCTCGCCTGCGAGGTGGTTTATGTCGACGACGGCAGCTCGGACACGACGCTGAGCATCGCCCGTAATCTGCCGGCGACG
ATGCTCGACGTTCAGGTGGTGTCGCTGTCGCGCAATTTCGGCAAGGAAGCCGCGCTGATGGCGGGACTCGACCACGCCAG
CCGCGGCGCCGTGCTGTTCATGGATGGCGACGGCCAGCATGCACCGGAACTGGTCGAGACGCTGGTGGGGCACTGGATCG
AGGACGGCTTCGACGTCGTCTATACGGCCAAGGCGCATCGCGACAACGAGCCGGCGCTGCGGCGCGCTGCGGTGCGCAGC
TTCTACACGCTGATCAATTGGGGCGCGCGGCAGAAGATCCCGGAAGATGCCGGCGACTTCCGCCTGCTGTCGCCGCGGGC
CGCACAGGCGCTGCGGCAGCTTCCCGAACGCAACCGCTTCTTCAAGGGCCTGGCGAGCTGGATCGGCTTCCGCCAAAAGC
GGGTCGACTACGAACCGGAGCCGCGCTCGCACGGCTTCAGCACGTTCTCGACCGCGCGGCTGATCGGGCTGTCGATCGAG
GGGCTGACCTCGTTCTCGGTGGCCCCGCTGCGGATCGCCAGCCTACTCGGCGTCGTACTGGCGATCAGCGCATTTCTGTT
CGGCCTATCCATCCTGTGGGAGACCTGGATCGACGGCAAATCGGTGCCGGGCTATCCGTCGATCATCGTCGGGATGATGA
CGATCGGCGGCGTGCAGCTGCTGATGATCGGCATCGTCGGCGAGTACATCGGCAAGATCCTGTCCGAGATGAAGGCGCGG
CCGATCTACTTCGTGGCCGAGCACAGCGTGAAGCGCGCCGACACCGATACCGGCGATCCGGCCAAGCGGTCCGCCGCCGA
ATGA

Upstream 100 bases:

>100_bases
GCAATAATGCCGAGGCAACCCGGCGCCGGTGGCGCCGGCGGGTGGAACCACCATATAGTCACGAGACAAACAAGGCCGTG
TGCAAGCCGGAAGTCGATCG

Downstream 100 bases:

>100_bases
GCACACCGGACCAGCGCCGGATCTGGCTGGTTGCCGATGACTACGGCATCAGCCCCGGGGTCAACCGCGCGATCCGCGAT
CTGATCGAACGCGGCCGGAT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MMLGSDVSGLSTEAGTAAALGLSIVVPAYNEAGGLQALHGRLITLAATLRQRYGLACEVVYVDDGSSDTTLSIARNLPAT
MLDVQVVSLSRNFGKEAALMAGLDHASRGAVLFMDGDGQHAPELVETLVGHWIEDGFDVVYTAKAHRDNEPALRRAAVRS
FYTLINWGARQKIPEDAGDFRLLSPRAAQALRQLPERNRFFKGLASWIGFRQKRVDYEPEPRSHGFSTFSTARLIGLSIE
GLTSFSVAPLRIASLLGVVLAISAFLFGLSILWETWIDGKSVPGYPSIIVGMMTIGGVQLLMIGIVGEYIGKILSEMKAR
PIYFVAEHSVKRADTDTGDPAKRSAAE

Sequences:

>Translated_347_residues
MMLGSDVSGLSTEAGTAAALGLSIVVPAYNEAGGLQALHGRLITLAATLRQRYGLACEVVYVDDGSSDTTLSIARNLPAT
MLDVQVVSLSRNFGKEAALMAGLDHASRGAVLFMDGDGQHAPELVETLVGHWIEDGFDVVYTAKAHRDNEPALRRAAVRS
FYTLINWGARQKIPEDAGDFRLLSPRAAQALRQLPERNRFFKGLASWIGFRQKRVDYEPEPRSHGFSTFSTARLIGLSIE
GLTSFSVAPLRIASLLGVVLAISAFLFGLSILWETWIDGKSVPGYPSIIVGMMTIGGVQLLMIGIVGEYIGKILSEMKAR
PIYFVAEHSVKRADTDTGDPAKRSAAE
>Mature_347_residues
MMLGSDVSGLSTEAGTAAALGLSIVVPAYNEAGGLQALHGRLITLAATLRQRYGLACEVVYVDDGSSDTTLSIARNLPAT
MLDVQVVSLSRNFGKEAALMAGLDHASRGAVLFMDGDGQHAPELVETLVGHWIEDGFDVVYTAKAHRDNEPALRRAAVRS
FYTLINWGARQKIPEDAGDFRLLSPRAAQALRQLPERNRFFKGLASWIGFRQKRVDYEPEPRSHGFSTFSTARLIGLSIE
GLTSFSVAPLRIASLLGVVLAISAFLFGLSILWETWIDGKSVPGYPSIIVGMMTIGGVQLLMIGIVGEYIGKILSEMKAR
PIYFVAEHSVKRADTDTGDPAKRSAAE

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=38.1877022653722, Blast_Score=214, Evalue=6e-57,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=30.42071197411, Blast_Score=134, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37466; Mature: 37466

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLGSDVSGLSTEAGTAAALGLSIVVPAYNEAGGLQALHGRLITLAATLRQRYGLACEVV
CCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
YVDDGSSDTTLSIARNLPATMLDVQVVSLSRNFGKEAALMAGLDHASRGAVLFMDGDGQH
EEECCCCCCEEHHHHCCCCHHHHHHHEEHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCC
APELVETLVGHWIEDGFDVVYTAKAHRDNEPALRRAAVRSFYTLINWGARQKIPEDAGDF
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCE
RLLSPRAAQALRQLPERNRFFKGLASWIGFRQKRVDYEPEPRSHGFSTFSTARLIGLSIE
EEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEC
GLTSFSVAPLRIASLLGVVLAISAFLFGLSILWETWIDGKSVPGYPSIIVGMMTIGGVQL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LMIGIVGEYIGKILSEMKARPIYFVAEHSVKRADTDTGDPAKRSAAE
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMLGSDVSGLSTEAGTAAALGLSIVVPAYNEAGGLQALHGRLITLAATLRQRYGLACEVV
CCCCCCCCCCCCCCCHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
YVDDGSSDTTLSIARNLPATMLDVQVVSLSRNFGKEAALMAGLDHASRGAVLFMDGDGQH
EEECCCCCCEEHHHHCCCCHHHHHHHEEHHHHCCHHHHHHHCCCCCCCCEEEEECCCCCC
APELVETLVGHWIEDGFDVVYTAKAHRDNEPALRRAAVRSFYTLINWGARQKIPEDAGDF
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCE
RLLSPRAAQALRQLPERNRFFKGLASWIGFRQKRVDYEPEPRSHGFSTFSTARLIGLSIE
EEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEC
GLTSFSVAPLRIASLLGVVLAISAFLFGLSILWETWIDGKSVPGYPSIIVGMMTIGGVQL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LMIGIVGEYIGKILSEMKARPIYFVAEHSVKRADTDTGDPAKRSAAE
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]