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The map label for this gene is fixC [C]

Identifier: 192289739

GI number: 192289739

Start: 1400293

End: 1401798

Strand: Reverse

Name: fixC [C]

Synonym: Rpal_1329

Alternate gene names: 192289739

Gene position: 1401798-1400293 (Counterclockwise)

Preceding gene: 192289740

Following gene: 192289736

Centisome position: 24.4

GC content: 69.32

Gene sequence:

>1506_bases
ATGACGCGCTTTGATGCAGTGGTAATTGGCGCCGGGCTCGGCGGCCTGACTGCGGGCGCGATCCTGGCCCGCGAAGGCCG
CAAGGTGCTGGTGATCGAGCGCGGCAACTCGGTCGGCGGCGCAGCCTCGAGCTACAAGGCCGGCGAACTGTTCGTCGAAG
GCTCGCTGCACATTACCGGCAATCCGCAGCACGGCCGCGATCCGAAACACAGCGCCTTGAGCCGCGCCGGCGTGCTCGAC
GCGGTGCAGTGGATTCCAGCCGGGGCGCTGTATCAGATGCGCGGCGGTCCGGTTGGCGAACCCTTCACACTCCCAGACGA
ATTCGCCGCTGCCCGCGACGCGCTGAACCAGCGCTTCCCCCACGCGAGCGCCGGGATCGCACAATGGCTCGGCGAACTCG
AACGCCTTGCCGGAACGCTCGGCGATGGCGGCCTCGACGCCGTGCTGGCACTGGCGCCGGAGTATCCCGATTGGCACGCG
CCGCTCGGCGACAAGCTGCAGGCGCTGTTCGGCGACGACGAAGCGGTGAAGTGCGCGGTCGCCGGCAACCTGTCCTACGT
CCACGATGATATCGCCGCGCTGTGGTGGGTGCCGTTCGCGATGGTGCAGGGCAGTTTCCTGCTCAGCGGCGCGCGCTTCA
TTCAGGGCGGATCGCAGCGGCTGTCGAGCGCGCTGGCCCGCGCGGTGCGCAAGGCCGGCGGCGAGGTGCTACTCCGCCGC
GTCGTCTCCGGCGTGGTGATGGGCGATCATGGCGGCCCGCATCAGGTCACCCACATCGCCCGCGACGGCGGTGACCCACA
GACCGTCGAGGCCTCGACCGTGATCGGCAATGCCGCGCCTTCGACGCTGGCAAGCCTGCTTCCTGCCGGCCAAGCGAAGC
TGCTCACCGACAGCTACGCCGATCGGACACCATCGCTCTCGCTGTTCGCGCTGACGCTCGGCCTGTCCAGGCCGCCTCGC
GAATTCGGTGTCAGCAGCTACGCCACGCAGTTGCTGCCGGACTGGATGACGACGCTGGCATCCTACGCCGAAGCCAAGAC
GCTGATGGCGGACGAGCCGGGTGCGCGGATGCCGCCGCTGGCGATCGCCGACTACACCGCGATCGATTCCGGCGTGCCGT
CGCCGCCTTACGTGCTGTCGGTGGTTGGCCCGGACCGGGTGTCGAACTGGGACGGCCTCGATCAGGACACCTATCGGGCC
AAGCGCGCCCGCTGGCAGCAGGCGCTGCTCGCCCATCTCGACCGCAGCTATCCGGGCCTCGCCGGCGCGGTGACGGCGGC
GGCGTTCAACACCGCCTACTCGGTGCAGCAATATCTCGGCGCGCCGCAGGGCGCGGTCTACGGCTTTGCGCCGCTGCTGC
CGAACTCGGATGCGCCCTATCGCACCCCGCGCACAGCCCTGCCAGGCCTGTATCTCGCGTCGGCTTATGCGGGCATCGGC
GGCTACAGCGGCGTGGTGCAGGCGGCGGAAGGATGCGCCGAGCTGATCCTGCAGGATCAGAAGTAG

Upstream 100 bases:

>100_bases
GCCCAGGATCGGCCGTCGCCAGGTCATGGAACCGCGATTTGACATGCCGCTGCAATGCGGCAATGAAGCGCTTCCCTTGG
ATGGCAGGATGATCGGCTGA

Downstream 100 bases:

>100_bases
CGTCAGTTCGTGTTGAGGTGGAACCGCAGCGGCTGCGGGCCACCGGTGAAGTTCACGAAATCGCCTTGCCGGCTCCAGCT
GGTCGCTGCGGCAAGCGCTG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene Dehydrogenase-Like Protein; Amine Oxidase; Phytoene Dehydrogenase-Related Protein; All-Trans-Retinol

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTRFDAVVIGAGLGGLTAGAILAREGRKVLVIERGNSVGGAASSYKAGELFVEGSLHITGNPQHGRDPKHSALSRAGVLD
AVQWIPAGALYQMRGGPVGEPFTLPDEFAAARDALNQRFPHASAGIAQWLGELERLAGTLGDGGLDAVLALAPEYPDWHA
PLGDKLQALFGDDEAVKCAVAGNLSYVHDDIAALWWVPFAMVQGSFLLSGARFIQGGSQRLSSALARAVRKAGGEVLLRR
VVSGVVMGDHGGPHQVTHIARDGGDPQTVEASTVIGNAAPSTLASLLPAGQAKLLTDSYADRTPSLSLFALTLGLSRPPR
EFGVSSYATQLLPDWMTTLASYAEAKTLMADEPGARMPPLAIADYTAIDSGVPSPPYVLSVVGPDRVSNWDGLDQDTYRA
KRARWQQALLAHLDRSYPGLAGAVTAAAFNTAYSVQQYLGAPQGAVYGFAPLLPNSDAPYRTPRTALPGLYLASAYAGIG
GYSGVVQAAEGCAELILQDQK

Sequences:

>Translated_501_residues
MTRFDAVVIGAGLGGLTAGAILAREGRKVLVIERGNSVGGAASSYKAGELFVEGSLHITGNPQHGRDPKHSALSRAGVLD
AVQWIPAGALYQMRGGPVGEPFTLPDEFAAARDALNQRFPHASAGIAQWLGELERLAGTLGDGGLDAVLALAPEYPDWHA
PLGDKLQALFGDDEAVKCAVAGNLSYVHDDIAALWWVPFAMVQGSFLLSGARFIQGGSQRLSSALARAVRKAGGEVLLRR
VVSGVVMGDHGGPHQVTHIARDGGDPQTVEASTVIGNAAPSTLASLLPAGQAKLLTDSYADRTPSLSLFALTLGLSRPPR
EFGVSSYATQLLPDWMTTLASYAEAKTLMADEPGARMPPLAIADYTAIDSGVPSPPYVLSVVGPDRVSNWDGLDQDTYRA
KRARWQQALLAHLDRSYPGLAGAVTAAAFNTAYSVQQYLGAPQGAVYGFAPLLPNSDAPYRTPRTALPGLYLASAYAGIG
GYSGVVQAAEGCAELILQDQK
>Mature_500_residues
TRFDAVVIGAGLGGLTAGAILAREGRKVLVIERGNSVGGAASSYKAGELFVEGSLHITGNPQHGRDPKHSALSRAGVLDA
VQWIPAGALYQMRGGPVGEPFTLPDEFAAARDALNQRFPHASAGIAQWLGELERLAGTLGDGGLDAVLALAPEYPDWHAP
LGDKLQALFGDDEAVKCAVAGNLSYVHDDIAALWWVPFAMVQGSFLLSGARFIQGGSQRLSSALARAVRKAGGEVLLRRV
VSGVVMGDHGGPHQVTHIARDGGDPQTVEASTVIGNAAPSTLASLLPAGQAKLLTDSYADRTPSLSLFALTLGLSRPPRE
FGVSSYATQLLPDWMTTLASYAEAKTLMADEPGARMPPLAIADYTAIDSGVPSPPYVLSVVGPDRVSNWDGLDQDTYRAK
RARWQQALLAHLDRSYPGLAGAVTAAAFNTAYSVQQYLGAPQGAVYGFAPLLPNSDAPYRTPRTALPGLYLASAYAGIGG
YSGVVQAAEGCAELILQDQK

Specific function: Probably Accepts Electrons From Fixa/Fixb And Reduces A Quinone. [C]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52405; Mature: 52274

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFDAVVIGAGLGGLTAGAILAREGRKVLVIERGNSVGGAASSYKAGELFVEGSLHITG
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECEEEECC
NPQHGRDPKHSALSRAGVLDAVQWIPAGALYQMRGGPVGEPFTLPDEFAAARDALNQRFP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
HASAGIAQWLGELERLAGTLGDGGLDAVLALAPEYPDWHAPLGDKLQALFGDDEAVKCAV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
AGNLSYVHDDIAALWWVPFAMVQGSFLLSGARFIQGGSQRLSSALARAVRKAGGEVLLRR
ECCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH
VVSGVVMGDHGGPHQVTHIARDGGDPQTVEASTVIGNAAPSTLASLLPAGQAKLLTDSYA
HHHCEEECCCCCCHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHC
DRTPSLSLFALTLGLSRPPREFGVSSYATQLLPDWMTTLASYAEAKTLMADEPGARMPPL
CCCCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AIADYTAIDSGVPSPPYVLSVVGPDRVSNWDGLDQDTYRAKRARWQQALLAHLDRSYPGL
EEECHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
AGAVTAAAFNTAYSVQQYLGAPQGAVYGFAPLLPNSDAPYRTPRTALPGLYLASAYAGIG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHCCC
GYSGVVQAAEGCAELILQDQK
CHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRFDAVVIGAGLGGLTAGAILAREGRKVLVIERGNSVGGAASSYKAGELFVEGSLHITG
CCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECEEEECC
NPQHGRDPKHSALSRAGVLDAVQWIPAGALYQMRGGPVGEPFTLPDEFAAARDALNQRFP
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
HASAGIAQWLGELERLAGTLGDGGLDAVLALAPEYPDWHAPLGDKLQALFGDDEAVKCAV
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEE
AGNLSYVHDDIAALWWVPFAMVQGSFLLSGARFIQGGSQRLSSALARAVRKAGGEVLLRR
ECCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH
VVSGVVMGDHGGPHQVTHIARDGGDPQTVEASTVIGNAAPSTLASLLPAGQAKLLTDSYA
HHHCEEECCCCCCHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHCCCCCHHHHHHHHC
DRTPSLSLFALTLGLSRPPREFGVSSYATQLLPDWMTTLASYAEAKTLMADEPGARMPPL
CCCCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AIADYTAIDSGVPSPPYVLSVVGPDRVSNWDGLDQDTYRAKRARWQQALLAHLDRSYPGL
EEECHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
AGAVTAAAFNTAYSVQQYLGAPQGAVYGFAPLLPNSDAPYRTPRTALPGLYLASAYAGIG
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHCCC
GYSGVVQAAEGCAELILQDQK
CHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA