Click here to switch to the map view.

The map label for this gene is 192289740

Identifier: 192289740

GI number: 192289740

Start: 1401911

End: 1403104

Strand: Reverse

Name: 192289740

Synonym: Rpal_1330

Alternate gene names: NA

Gene position: 1403104-1401911 (Counterclockwise)

Preceding gene: 192289741

Following gene: 192289739

Centisome position: 24.43

GC content: 66.42

Gene sequence:

>1194_bases
ATGCGCGCATTCCTGTTCAGCCTGCTGGCCCTGCTGCCGGCGACCGATGTCGCCCTGGCCCAGAGCAAGTCCGCGACCAA
ATCGGCAGCGCCGCCGGCCAACGAGACGCGCTATTTCACCGCCATCGATGGCTTCATGGACGGCGCCGACGTCATCCTGA
AGGAGAAGCGCCAGGGCAAGACGGTCACCTCCGCCGAGCTCGACGTCTGCTATTCGCCGTCGAAGACCTCGGACCGCCGC
GACCGCTTCGTCGTCACCCTGACTCCGAACGGCCAGGCCCTGACCGGGACGACGCAGACGCTCGGCGGCAAGGCGCCGGT
CTCGGTGAGCCTGCAGCAGAGGCCGAATGGCGAGACATTCGACTTCAAAGGCGTGATCGGGATCGGAACCGCCACGCACG
AGGTCACCTCGACCGACAACGCCGATCTCAGCGAGAAGGAATTCCAGGAGAACCAGTCCGTCGACGACAGCATCGCGCAG
GCACCAAAGGACTTTACCGCGGTGTCGCCGGAAGCCGTCGGGGTTCGCGTCGCGCTCGAAGGCGCTTCGGATTTCCTGAA
GACGCTGAAGACCGAGAATGTCGAAGTGTCGCTGTCGAGCCTCAGCATCGGCTGCGACGCGCTGCGCGCCGGCAAGCTGG
TGGTCAACCTCACCGTCGATCCGGAACGCGCCGCTGCGGTGATCGCCAAGGCCAAGGCGTTCCCCGGCGTTGCCGCAGCC
GGCTGGACCAACGGCATCGTCGACATGGACCGCACCGTCCTGTTCCCGGCGGCGGGCTGGCGCGATGGCGGCAAGATCAA
TCGCGAGAAGATCGCCAATACCATCACCGCCACCCTGTCGCAGACGCTGGAGGCCAAGCTCGCCTCGGCGGTGTGGGACG
ATGCAAGCGGCAAGCTGAAGATGACCTTCAAGCGGCCGAGCGAGACGTTCCCGGCGCTGCAGCTCACCGAGGTGATCACG
GTCGAGGCGCTGGTCAGCGCCGACAAGCCGGGCGGCACCGACAAGCTGATGCTGTGGCTCGGCAACGCCAGCGACACCAC
GGTCGATGAGAACGCGCCGCCGCGGCTCGGCCTCAACGACGACGCTCCCGGCGAAGAGGAAGGTGAGCCCCGCACCGATG
GCGGCGCGGTCGCGGCTCTCGCCAAGGAACTCAAAGGCCAGCGTTGGGATTCCGAAAGCTCGACTTGGCAATAG

Upstream 100 bases:

>100_bases
ATTTCCGGTTCTGGCGCGTTGTGTCCCAGCGAACGGTTGTCCACTCGGCTCCCAAAAAGCTCTAGGTTCGATGCAGCCTG
ATTCTCGCGAGGTTCATGTG

Downstream 100 bases:

>100_bases
CGCGCAGCAAGCGCCCAGGATCGGCCGTCGCCAGGTCATGGAACCGCGATTTGACATGCCGCTGCAATGCGGCAATGAAG
CGCTTCCCTTGGATGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRAFLFSLLALLPATDVALAQSKSATKSAAPPANETRYFTAIDGFMDGADVILKEKRQGKTVTSAELDVCYSPSKTSDRR
DRFVVTLTPNGQALTGTTQTLGGKAPVSVSLQQRPNGETFDFKGVIGIGTATHEVTSTDNADLSEKEFQENQSVDDSIAQ
APKDFTAVSPEAVGVRVALEGASDFLKTLKTENVEVSLSSLSIGCDALRAGKLVVNLTVDPERAAAVIAKAKAFPGVAAA
GWTNGIVDMDRTVLFPAAGWRDGGKINREKIANTITATLSQTLEAKLASAVWDDASGKLKMTFKRPSETFPALQLTEVIT
VEALVSADKPGGTDKLMLWLGNASDTTVDENAPPRLGLNDDAPGEEEGEPRTDGGAVAALAKELKGQRWDSESSTWQ

Sequences:

>Translated_397_residues
MRAFLFSLLALLPATDVALAQSKSATKSAAPPANETRYFTAIDGFMDGADVILKEKRQGKTVTSAELDVCYSPSKTSDRR
DRFVVTLTPNGQALTGTTQTLGGKAPVSVSLQQRPNGETFDFKGVIGIGTATHEVTSTDNADLSEKEFQENQSVDDSIAQ
APKDFTAVSPEAVGVRVALEGASDFLKTLKTENVEVSLSSLSIGCDALRAGKLVVNLTVDPERAAAVIAKAKAFPGVAAA
GWTNGIVDMDRTVLFPAAGWRDGGKINREKIANTITATLSQTLEAKLASAVWDDASGKLKMTFKRPSETFPALQLTEVIT
VEALVSADKPGGTDKLMLWLGNASDTTVDENAPPRLGLNDDAPGEEEGEPRTDGGAVAALAKELKGQRWDSESSTWQ
>Mature_397_residues
MRAFLFSLLALLPATDVALAQSKSATKSAAPPANETRYFTAIDGFMDGADVILKEKRQGKTVTSAELDVCYSPSKTSDRR
DRFVVTLTPNGQALTGTTQTLGGKAPVSVSLQQRPNGETFDFKGVIGIGTATHEVTSTDNADLSEKEFQENQSVDDSIAQ
APKDFTAVSPEAVGVRVALEGASDFLKTLKTENVEVSLSSLSIGCDALRAGKLVVNLTVDPERAAAVIAKAKAFPGVAAA
GWTNGIVDMDRTVLFPAAGWRDGGKINREKIANTITATLSQTLEAKLASAVWDDASGKLKMTFKRPSETFPALQLTEVIT
VEALVSADKPGGTDKLMLWLGNASDTTVDENAPPRLGLNDDAPGEEEGEPRTDGGAVAALAKELKGQRWDSESSTWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42006; Mature: 42006

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFLFSLLALLPATDVALAQSKSATKSAAPPANETRYFTAIDGFMDGADVILKEKRQGK
CHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
TVTSAELDVCYSPSKTSDRRDRFVVTLTPNGQALTGTTQTLGGKAPVSVSLQQRPNGETF
EEEECEEEEEECCCCCCCCCCEEEEEECCCCCEEECCHHHCCCCCCEEEEEECCCCCCCE
DFKGVIGIGTATHEVTSTDNADLSEKEFQENQSVDDSIAQAPKDFTAVSPEAVGVRVALE
EECEEEEECCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC
GASDFLKTLKTENVEVSLSSLSIGCDALRAGKLVVNLTVDPERAAAVIAKAKAFPGVAAA
CHHHHHHHHCCCCEEEEEEHEECCHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCCEEC
GWTNGIVDMDRTVLFPAAGWRDGGKINREKIANTITATLSQTLEAKLASAVWDDASGKLK
CCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MTFKRPSETFPALQLTEVITVEALVSADKPGGTDKLMLWLGNASDTTVDENAPPRLGLND
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
DAPGEEEGEPRTDGGAVAALAKELKGQRWDSESSTWQ
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRAFLFSLLALLPATDVALAQSKSATKSAAPPANETRYFTAIDGFMDGADVILKEKRQGK
CHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
TVTSAELDVCYSPSKTSDRRDRFVVTLTPNGQALTGTTQTLGGKAPVSVSLQQRPNGETF
EEEECEEEEEECCCCCCCCCCEEEEEECCCCCEEECCHHHCCCCCCEEEEEECCCCCCCE
DFKGVIGIGTATHEVTSTDNADLSEKEFQENQSVDDSIAQAPKDFTAVSPEAVGVRVALE
EECEEEEECCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEEEC
GASDFLKTLKTENVEVSLSSLSIGCDALRAGKLVVNLTVDPERAAAVIAKAKAFPGVAAA
CHHHHHHHHCCCCEEEEEEHEECCHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCCEEC
GWTNGIVDMDRTVLFPAAGWRDGGKINREKIANTITATLSQTLEAKLASAVWDDASGKLK
CCCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MTFKRPSETFPALQLTEVITVEALVSADKPGGTDKLMLWLGNASDTTVDENAPPRLGLND
EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
DAPGEEEGEPRTDGGAVAALAKELKGQRWDSESSTWQ
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA