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The map label for this gene is 192289472

Identifier: 192289472

GI number: 192289472

Start: 1116652

End: 1118127

Strand: Reverse

Name: 192289472

Synonym: Rpal_1047

Alternate gene names: NA

Gene position: 1118127-1116652 (Counterclockwise)

Preceding gene: 192289473

Following gene: 192289471

Centisome position: 19.47

GC content: 62.13

Gene sequence:

>1476_bases
ATGTCTACGACCGGCCCTCAGGCCTCAAGCGACAATTCTGCACGAGGGAGTTCGCTGCGGCTGGCAGCTATGCAATCGAC
TAACAGTATCGCTCCCCTGTCGCCAAGGGGGACTTTGCTGGCGGCGCTCTTCACCACCGTTGTTCTGGCGTTCGGCGGCT
GCACGCTGCTGCCGAACGGCACCTCAGAAGAAGAAGCCAACCTCAATTCGGTTGCACCTGCCTATGAGCCGCCGGTCGCC
GATCGTCAGTTGCCGCTCGTGCCCGCGCCGGCGCGATGGCGCGATGTCTTGCGCCGCGCGTTCTTTGCCAACGGAGAGTT
GGAATCCGCCTACTTCGAATGGAAGGCCGCCTTCGCCCGCATCGATCAAGCCGCGACCTGGCCCAACAGCAACGTCGCCG
TCAATTTCAGCTACATGTTTTCCGCCGAGAAGCTCAAGGCGTGGGACCGCACCACGGTCGGCGTCGGCTTCGATCCATCG
ATGAACCTGTCGCTGCCGATCAAAGTGCAGACCGCGGCCGAGGTTGCTCTGGAATCCGCCAGGCAAGCCGGCGAGAAGCT
TCGCGCGACAAAGTTTGAACTGCAGCGAAAAGTCATTTCCGCTTATCTGGATCTGGCGCTGAGTGAGGAAAAGTTTCGGG
TTCAACGCGACAATCTGACGCTTCTTAAGCTTGTCAACGATTCGGCGGCCGCGCGCGCGCAATCCGGCGGCGCGCTGCAG
GACTTGCTCAAGGTTCAGATCGAGTCTCAGATGGCCGAGAATGAACTGGCGAACTTGGCAGCGGAGGCCAAGTCGATACG
AGGGTCGCTGAACGGCATGCTCGCGCGCGACGCCAATGCGCCGCTGAGACTGCCGTCAACTCTGCCGTCGCAGCGAACCG
TCGCCGTCGATGACGCCCAGCTTCTGGCGGCGGCGGTTGAACAGAACCCGGAACTGGCCGGGCTTGCCCGGCAGGTGGCC
GGGCGAAAGGACGCTATCGAACTTGCAAGGCTGGCCTATCTGCCCGATTTCGTTCCCTCAGGGACCGTGACAGGCAATGT
TTCACAGGTTGTTTCGTCGATGGTGATGCTGCCGACAAAACTGCCGGCCATCCGCGGCGCCATCAGGGAAGCGGAGGCCA
TGATGCGATCGTCAGAAGCAATGTTGCGGCAGACCACGAGAGACCGCGCCGCCAGCTTCGTGGCAAACCTGTACTTGATG
CGAAATGCGGAGCGGCAAATCGCCCTGTACCGTCAGCGTATCGTGCCGGCCGCCCAGCAACTGGTGAACGCGTCCCGGAG
CGATTACACCGCCGGGACCGCGGCATTTTCCGATCTCATCGACAGCCAGAGGATACTGATCGCCGCCCGTCTTGCGGCCG
CTCAGGTCCGGATCGAGCGTGAGAAGCGACTGGCGGAAATTGAGGCGCTTGCGGGTGTCGACATCGAGACACTTGGAACG
TCGCCACCCGGAGCGGCCTCGCTGGCCGCACAATAG

Upstream 100 bases:

>100_bases
GTCCATCAATTCCGTTTCGCTTCCTCGTTTGATCGGTTCGAGAGTCGCCAGCTCGACATACGGGATAAGGAAACCTTGTT
CGCGACACAGGACGTTCTCA

Downstream 100 bases:

>100_bases
AAAGTCCAGCACCGTGAGGGATCTCGTGTCGACGAAACGATATCGGAAGTCGATCGGCCCTGCCCTGGCCCAACTGATGG
TCTTGTGCGCGGGCTACTTC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Cation Efflux System Protein CusC

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSTTGPQASSDNSARGSSLRLAAMQSTNSIAPLSPRGTLLAALFTTVVLAFGGCTLLPNGTSEEEANLNSVAPAYEPPVA
DRQLPLVPAPARWRDVLRRAFFANGELESAYFEWKAAFARIDQAATWPNSNVAVNFSYMFSAEKLKAWDRTTVGVGFDPS
MNLSLPIKVQTAAEVALESARQAGEKLRATKFELQRKVISAYLDLALSEEKFRVQRDNLTLLKLVNDSAAARAQSGGALQ
DLLKVQIESQMAENELANLAAEAKSIRGSLNGMLARDANAPLRLPSTLPSQRTVAVDDAQLLAAAVEQNPELAGLARQVA
GRKDAIELARLAYLPDFVPSGTVTGNVSQVVSSMVMLPTKLPAIRGAIREAEAMMRSSEAMLRQTTRDRAASFVANLYLM
RNAERQIALYRQRIVPAAQQLVNASRSDYTAGTAAFSDLIDSQRILIAARLAAAQVRIEREKRLAEIEALAGVDIETLGT
SPPGAASLAAQ

Sequences:

>Translated_491_residues
MSTTGPQASSDNSARGSSLRLAAMQSTNSIAPLSPRGTLLAALFTTVVLAFGGCTLLPNGTSEEEANLNSVAPAYEPPVA
DRQLPLVPAPARWRDVLRRAFFANGELESAYFEWKAAFARIDQAATWPNSNVAVNFSYMFSAEKLKAWDRTTVGVGFDPS
MNLSLPIKVQTAAEVALESARQAGEKLRATKFELQRKVISAYLDLALSEEKFRVQRDNLTLLKLVNDSAAARAQSGGALQ
DLLKVQIESQMAENELANLAAEAKSIRGSLNGMLARDANAPLRLPSTLPSQRTVAVDDAQLLAAAVEQNPELAGLARQVA
GRKDAIELARLAYLPDFVPSGTVTGNVSQVVSSMVMLPTKLPAIRGAIREAEAMMRSSEAMLRQTTRDRAASFVANLYLM
RNAERQIALYRQRIVPAAQQLVNASRSDYTAGTAAFSDLIDSQRILIAARLAAAQVRIEREKRLAEIEALAGVDIETLGT
SPPGAASLAAQ
>Mature_490_residues
STTGPQASSDNSARGSSLRLAAMQSTNSIAPLSPRGTLLAALFTTVVLAFGGCTLLPNGTSEEEANLNSVAPAYEPPVAD
RQLPLVPAPARWRDVLRRAFFANGELESAYFEWKAAFARIDQAATWPNSNVAVNFSYMFSAEKLKAWDRTTVGVGFDPSM
NLSLPIKVQTAAEVALESARQAGEKLRATKFELQRKVISAYLDLALSEEKFRVQRDNLTLLKLVNDSAAARAQSGGALQD
LLKVQIESQMAENELANLAAEAKSIRGSLNGMLARDANAPLRLPSTLPSQRTVAVDDAQLLAAAVEQNPELAGLARQVAG
RKDAIELARLAYLPDFVPSGTVTGNVSQVVSSMVMLPTKLPAIRGAIREAEAMMRSSEAMLRQTTRDRAASFVANLYLMR
NAERQIALYRQRIVPAAQQLVNASRSDYTAGTAAFSDLIDSQRILIAARLAAAQVRIEREKRLAEIEALAGVDIETLGTS
PPGAASLAAQ

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52723; Mature: 52591

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTGPQASSDNSARGSSLRLAAMQSTNSIAPLSPRGTLLAALFTTVVLAFGGCTLLPNG
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCC
TSEEEANLNSVAPAYEPPVADRQLPLVPAPARWRDVLRRAFFANGELESAYFEWKAAFAR
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IDQAATWPNSNVAVNFSYMFSAEKLKAWDRTTVGVGFDPSMNLSLPIKVQTAAEVALESA
HHHHCCCCCCCEEEEEEEEECHHHHHHCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHH
RQAGEKLRATKFELQRKVISAYLDLALSEEKFRVQRDNLTLLKLVNDSAAARAQSGGALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCEEEEEEECCHHHHHHCCCCHHH
DLLKVQIESQMAENELANLAAEAKSIRGSLNGMLARDANAPLRLPSTLPSQRTVAVDDAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCEEEECHHH
LLAAAVEQNPELAGLARQVAGRKDAIELARLAYLPDFVPSGTVTGNVSQVVSSMVMLPTK
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LPAIRGAIREAEAMMRSSEAMLRQTTRDRAASFVANLYLMRNAERQIALYRQRIVPAAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVNASRSDYTAGTAAFSDLIDSQRILIAARLAAAQVRIEREKRLAEIEALAGVDIETLGT
HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
SPPGAASLAAQ
CCCCCCCCCCC
>Mature Secondary Structure 
STTGPQASSDNSARGSSLRLAAMQSTNSIAPLSPRGTLLAALFTTVVLAFGGCTLLPNG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCC
TSEEEANLNSVAPAYEPPVADRQLPLVPAPARWRDVLRRAFFANGELESAYFEWKAAFAR
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IDQAATWPNSNVAVNFSYMFSAEKLKAWDRTTVGVGFDPSMNLSLPIKVQTAAEVALESA
HHHHCCCCCCCEEEEEEEEECHHHHHHCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHHH
RQAGEKLRATKFELQRKVISAYLDLALSEEKFRVQRDNLTLLKLVNDSAAARAQSGGALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCEEEEEEECCHHHHHHCCCCHHH
DLLKVQIESQMAENELANLAAEAKSIRGSLNGMLARDANAPLRLPSTLPSQRTVAVDDAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCEEEECHHH
LLAAAVEQNPELAGLARQVAGRKDAIELARLAYLPDFVPSGTVTGNVSQVVSSMVMLPTK
HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LPAIRGAIREAEAMMRSSEAMLRQTTRDRAASFVANLYLMRNAERQIALYRQRIVPAAQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVNASRSDYTAGTAAFSDLIDSQRILIAARLAAAQVRIEREKRLAEIEALAGVDIETLGT
HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
SPPGAASLAAQ
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA