| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cusB [H]
Identifier: 192289471
GI number: 192289471
Start: 1115328
End: 1116626
Strand: Reverse
Name: cusB [H]
Synonym: Rpal_1046
Alternate gene names: 192289471
Gene position: 1116626-1115328 (Counterclockwise)
Preceding gene: 192289472
Following gene: 192289470
Centisome position: 19.44
GC content: 60.43
Gene sequence:
>1299_bases GTGTCGACGAAACGATATCGGAAGTCGATCGGCCCTGCCCTGGCCCAACTGATGGTCTTGTGCGCGGGCTACTTCATCAG CCAAGACGCGAGTTCAGCACAACAGGCCCCCGAGCCCCAGCAGAACATGCCGGCCGATCACTCCGTGCCCGGCAATTCGA TGCCTCCGGGATATACGGAACTAAGCGTCGATCCGGCAATCCGGCAGCGTATCGGAGTTACGCTGGGAAGGGCGACGCGG ACCCCCCTCACCATGACCATTCGAACGGTCGGGATCGTACGTCCCGATGAAACCAAGCTTGCTCATATTCACCTCAAGAC CGAAGGCTGGGTCGAACGACTGTTCGTCTCTTTCACCGGGCAACAGGTGAAAGCCGGCGAAGCCATGCTTGCGATCTACA GTCCGGCCTTCTTTGCGGCCCAGAGAGAGCTGTTGTCCGCGGCGCGGTCGGCACAATCCAATCTCGGAGGCATGACAGAT CAACAGCTGGTGTTGGAAGCCGCGCGTCGACGCCTGGAGCTTTGGGATGTGCCTGCCGATGCGATCAAGGCCCTGGAGGC GACCGGGCGGCCCGGGACGTCGTTGGTACTACGCAGTCCAATCTCAGGTACCGTCCTGGAGAAGAAGGTCTTTCAAGGTC AATACACGATGCCGCAGAACGAACTGTTCGTCGTCGCCGACCTCTCGACGGTGTGGGTTCAGGGCAAGGTCTTCGAGTAT GAATTGCCGCACGTCCAGATCGGCATGGCTGTGACTGTCGCGCTGCCCTCGTCGCCGACGCAACAATATACCGGCAAGGT CGTGTTCATCGATCCGGTGGTCGACGAGATGACCCGATCGGTGCAAGTCCGCGTCGAGCTACCAAATCCCGACGGCCGAC TGAAGCCAGGCATGTTCAGTCAGATCTTGATCAGCCACGCGATGGGAAGCGGCTTGACCGTTCCGGTATCGGCCGTCATC CGCACCGGCGAACGCAACATCGCGTTCCGAGCTGTTGCCGATGATCGCTTTCTCCCGGTCCAAGTGAAAATCAGCCCGCT GCGGTTCGAGGATCGATTCCAGATCCTGGAGGGGCTGGAGGATGGCGACATGGTTGCCACTTCCGCCAACTTCTTGATCG ATTCCGAAAGCCAGCTACTGGCCGGCGGCGGTGGTATGGCCGGCATGCCCGGGATGGACGACGGCAGCAAGGCCAACGAG AACAAACCGGCAGCCCGGCCGCAGGACGTCAAGGGGATGTCGATGCCAAATCGACCTGCCGCAGACGATCATTCCACCAT GAAACACGATCGTCCGTGA
Upstream 100 bases:
>100_bases GAGGCGCTTGCGGGTGTCGACATCGAGACACTTGGAACGTCGCCACCCGGAGCGGCCTCGCTGGCCGCACAATAGAAAGT CCAGCACCGTGAGGGATCTC
Downstream 100 bases:
>100_bases GCGAAAGATAGACCATGATCGGCCGGCTGATCGAGTTCAGCGCGCGGAACGCGCTTCTCATGCTTCTCCTTATCGTGGCC ATCATCGGCGGAGGCGTTTG
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSTKRYRKSIGPALAQLMVLCAGYFISQDASSAQQAPEPQQNMPADHSVPGNSMPPGYTELSVDPAIRQRIGVTLGRATR TPLTMTIRTVGIVRPDETKLAHIHLKTEGWVERLFVSFTGQQVKAGEAMLAIYSPAFFAAQRELLSAARSAQSNLGGMTD QQLVLEAARRRLELWDVPADAIKALEATGRPGTSLVLRSPISGTVLEKKVFQGQYTMPQNELFVVADLSTVWVQGKVFEY ELPHVQIGMAVTVALPSSPTQQYTGKVVFIDPVVDEMTRSVQVRVELPNPDGRLKPGMFSQILISHAMGSGLTVPVSAVI RTGERNIAFRAVADDRFLPVQVKISPLRFEDRFQILEGLEDGDMVATSANFLIDSESQLLAGGGGMAGMPGMDDGSKANE NKPAARPQDVKGMSMPNRPAADDHSTMKHDRP
Sequences:
>Translated_432_residues MSTKRYRKSIGPALAQLMVLCAGYFISQDASSAQQAPEPQQNMPADHSVPGNSMPPGYTELSVDPAIRQRIGVTLGRATR TPLTMTIRTVGIVRPDETKLAHIHLKTEGWVERLFVSFTGQQVKAGEAMLAIYSPAFFAAQRELLSAARSAQSNLGGMTD QQLVLEAARRRLELWDVPADAIKALEATGRPGTSLVLRSPISGTVLEKKVFQGQYTMPQNELFVVADLSTVWVQGKVFEY ELPHVQIGMAVTVALPSSPTQQYTGKVVFIDPVVDEMTRSVQVRVELPNPDGRLKPGMFSQILISHAMGSGLTVPVSAVI RTGERNIAFRAVADDRFLPVQVKISPLRFEDRFQILEGLEDGDMVATSANFLIDSESQLLAGGGGMAGMPGMDDGSKANE NKPAARPQDVKGMSMPNRPAADDHSTMKHDRP >Mature_431_residues STKRYRKSIGPALAQLMVLCAGYFISQDASSAQQAPEPQQNMPADHSVPGNSMPPGYTELSVDPAIRQRIGVTLGRATRT PLTMTIRTVGIVRPDETKLAHIHLKTEGWVERLFVSFTGQQVKAGEAMLAIYSPAFFAAQRELLSAARSAQSNLGGMTDQ QLVLEAARRRLELWDVPADAIKALEATGRPGTSLVLRSPISGTVLEKKVFQGQYTMPQNELFVVADLSTVWVQGKVFEYE LPHVQIGMAVTVALPSSPTQQYTGKVVFIDPVVDEMTRSVQVRVELPNPDGRLKPGMFSQILISHAMGSGLTVPVSAVIR TGERNIAFRAVADDRFLPVQVKISPLRFEDRFQILEGLEDGDMVATSANFLIDSESQLLAGGGGMAGMPGMDDGSKANEN KPAARPQDVKGMSMPNRPAADDHSTMKHDRP
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=324, Percent_Identity=28.3950617283951, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46921; Mature: 46790
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKRYRKSIGPALAQLMVLCAGYFISQDASSAQQAPEPQQNMPADHSVPGNSMPPGYTE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCEE LSVDPAIRQRIGVTLGRATRTPLTMTIRTVGIVRPDETKLAHIHLKTEGWVERLFVSFTG EECCHHHHHHHCCEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEECHHHHHHHHHHHCC QQVKAGEAMLAIYSPAFFAAQRELLSAARSAQSNLGGMTDQQLVLEAARRRLELWDVPAD CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHH AIKALEATGRPGTSLVLRSPISGTVLEKKVFQGQYTMPQNELFVVADLSTVWVQGKVFEY HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECEEEEE ELPHVQIGMAVTVALPSSPTQQYTGKVVFIDPVVDEMTRSVQVRVELPNPDGRLKPGMFS ECCEEEEEEEEEEEECCCCCHHHCCCEEEECHHHHHCCCEEEEEEECCCCCCCCCCCHHH QILISHAMGSGLTVPVSAVIRTGERNIAFRAVADDRFLPVQVKISPLRFEDRFQILEGLE HHHHHHHCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCC DGDMVATSANFLIDSESQLLAGGGGMAGMPGMDDGSKANENKPAARPQDVKGMSMPNRPA CCCEEEECCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADDHSTMKHDRP CCCCCCCCCCCC >Mature Secondary Structure STKRYRKSIGPALAQLMVLCAGYFISQDASSAQQAPEPQQNMPADHSVPGNSMPPGYTE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCEE LSVDPAIRQRIGVTLGRATRTPLTMTIRTVGIVRPDETKLAHIHLKTEGWVERLFVSFTG EECCHHHHHHHCCEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEECHHHHHHHHHHHCC QQVKAGEAMLAIYSPAFFAAQRELLSAARSAQSNLGGMTDQQLVLEAARRRLELWDVPAD CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCHH AIKALEATGRPGTSLVLRSPISGTVLEKKVFQGQYTMPQNELFVVADLSTVWVQGKVFEY HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECEEEEE ELPHVQIGMAVTVALPSSPTQQYTGKVVFIDPVVDEMTRSVQVRVELPNPDGRLKPGMFS ECCEEEEEEEEEEEECCCCCHHHCCCEEEECHHHHHCCCEEEEEEECCCCCCCCCCCHHH QILISHAMGSGLTVPVSAVIRTGERNIAFRAVADDRFLPVQVKISPLRFEDRFQILEGLE HHHHHHHCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCC DGDMVATSANFLIDSESQLLAGGGGMAGMPGMDDGSKANENKPAARPQDVKGMSMPNRPA CCCEEEECCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADDHSTMKHDRP CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]